RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 IGHV3-21A0A0B4J1V1 117 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 CRXO43186 299 aaPredicted RBP9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 CAMPP49913 170 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 PRR20EP86478 221 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 PRR20CP86479 221 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 PRR20DP86480 221 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 PRR20BP86481 221 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 PRR20AP86496 221 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 TMEM97Q5BJF2 176 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 HCP5Q6MZN7 132 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 PERPQ96FX8 193 aa9.1□□□□□ -0.95
PCDHGA9-202ENST00000616887 BUB1B-PAK6H3BSN5 160 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 ISLRO14498 428 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 UTP20O75691 2785 aaKnown RBP9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 KLF5Q13887 457 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 MORN5Q5VZ52 161 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 OR1L8Q8NGR8 309 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 OR10AG1Q8NH19 301 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 RAB37Q96AX2 223 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 IGHV1-3A0A0C4DH29 117 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 LEPROTL1O95214 131 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 HIST1H1EP10412 219 aaKnown RBP9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 PLA2G2AP14555 144 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 AREGP15514 252 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 CRYBA4P53673 196 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 SEC11AP67812 179 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 C2orf83Q53S99 150 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 C2orf91Q6ZV80 131 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 BPIFA4PQ86YQ2 179 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 C8orf31Q8N9H6 132 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 STXBP6Q8NFX7 210 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 ITLN2Q8WWU7 325 aaPredicted RBP9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 RAB1BQ9H0U4 201 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 HILPDAQ9Y5L2 63 aa9.09□□□□□ -0.95
PCDHGA9-202ENST00000616887 MYO18BQ8IUG5 2567 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 A0A0G2JLM5 398 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 TEX48A0A1B0GUV7 120 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 CKS1BP61024 79 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 CD69Q07108 199 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 IGHV1-24A0A0C4DH33 117 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 H3BRM9 83 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 FOXA3P55318 350 aaPredicted RBP9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 UBTD1Q9HAC8 227 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 TIMM8BQ9Y5J9 83 aaPredicted RBP9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 INSIG2Q9Y5U4 225 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 SPG11Q96JI7 2443 aa9.08□□□□□ -0.96
PCDHGA9-202ENST00000616887 CELSR2Q9HCU4 2923 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 ZNF207O43670 478 aaKnown RBP9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 SMIM17P0DL12 118 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 HSD52Q0P140 79 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 RAB31Q13636 194 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 FBXL15Q9H469 300 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 ZNF355PQ9NSJ1 428 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 SPCS1Q9Y6A9 102 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 USP9XQ93008 2570 aaPredicted RBP9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 J3QKU1 62 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 IGLV2-8P01709 118 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 ERHP84090 104 aaKnown RBP9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 PSG5Q15238 335 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 VSTM2AQ8TAG5 236 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 RPEQ96AT9 228 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 ZNF503Q96F45 646 aa9.07□□□□□ -0.96
PCDHGA9-202ENST00000616887 UBR5O95071 2799 aaPredicted RBP9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 TRAV5A0A0B4J249 113 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 PSG3Q16557 428 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 VMA21Q3ZAQ7 101 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 NUP35Q8NFH5 326 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 NPIPB3Q92617 1050 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 C1RLQ9NZP8 487 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 TSSC4Q9Y5U2 329 aaPredicted RBP9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 TIMM23O14925 209 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 MOSP00540 346 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 LIPFP07098 398 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 COX8AP10176 69 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 KIR3DS1Q14943 382 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 WIPF2Q8TF74 440 aaPredicted RBP9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 MS4A6AQ9H2W1 248 aa9.06□□□□□ -0.96
PCDHGA9-202ENST00000616887 A6NDN8 102 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 FBLL1A6NHQ2 334 aaKnown RBP9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 PF4V1P10720 104 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 ZFP36P26651 326 aaKnown RBP9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 LY6G5BQ8NDX9 201 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 SIGLEC9Q9Y336 463 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 IGKV1D-37A0A075B6S9 117 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 A0A1W2PRE2 83 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 GAGE12HA6NDE8 117 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 C8orf46Q8TAG6 207 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 TIMD4Q96H15 378 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 MAP1LC3CQ9BXW4 147 aa9.05□□□□□ -0.96
PCDHGA9-202ENST00000616887 PSMB11A5LHX3 300 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 LY6LH3BQJ8 138 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 FSTL3O95633 263 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 CRYGBP07316 175 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 CCDC144NLQ6NUI1 221 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
PCDHGA9-202ENST00000616887 OR5A1Q8NGJ0 315 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms