RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 IGHV3-66A0A0C4DH42 116 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 WIPF1O43516 503 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 IGLV1-51P01701 117 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 OR10J4P0C629 311 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 PYYP10082 97 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 ID1P41134 155 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 CMC4P56277 68 aaPredicted RBP8.8□□□□□ -1
TARDBP-217ENST00000616545 RPL11P62913 178 aaKnown RBP8.8□□□□□ -1
TARDBP-217ENST00000616545 PRR31Q5SQ13 230 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 LCN12Q6JVE5 192 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 IQCF2Q8IXL9 164 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 SPAG8Q99932 426 aaPredicted RBP8.8□□□□□ -1
TARDBP-217ENST00000616545 SMDT1Q9H4I9 107 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 AAMDCQ9H7C9 122 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 ZNF586Q9NXT0 402 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 PRELID1Q9Y255 219 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 SMAD5-AS1Q9Y6J3 95 aa8.8□□□□□ -1
TARDBP-217ENST00000616545 H3BQ15 152 aa8.79□□□□□ -1
TARDBP-217ENST00000616545 DNASE2O00115 360 aaPredicted RBP8.79□□□□□ -1
TARDBP-217ENST00000616545 ISLRO14498 428 aa8.79□□□□□ -1
TARDBP-217ENST00000616545 MRPL53Q96EL3 112 aaKnown RBP8.79□□□□□ -1
TARDBP-217ENST00000616545 COL6A5A8TX70 2615 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 RAB19A4D1S5 217 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 OR4C46A6NHA9 309 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 SNRPD3P62318 126 aaKnown RBP8.78□□□□□ -1
TARDBP-217ENST00000616545 CD300EQ496F6 205 aaPredicted RBP8.78□□□□□ -1
TARDBP-217ENST00000616545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 TMEM61Q8N0U2 210 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 RXFP4Q8TDU9 374 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 FAM210AQ96ND0 272 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 MS4A6AQ9H2W1 248 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 TMPRSS5Q9H3S3 457 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 ZNF331Q9NQX6 463 aaPredicted RBP8.78□□□□□ -1
TARDBP-217ENST00000616545 OTORQ9NRC9 128 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 GNG13Q9P2W3 67 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 VAX2Q9UIW0 290 aa8.78□□□□□ -1
TARDBP-217ENST00000616545 FBN1P35555 2871 aaKnown RBP8.77□□□□□ -1.01
TARDBP-217ENST00000616545 A0A1B0GV50 99 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 LINC00862A6NCI5 91 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 RBFOX3A6NFN3 312 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 FAM74A7A6NL05 159 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 F6UZH7 168 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 K7EQG2 157 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 EIF3GO75821 320 aaKnown RBP eCLIP8.77□□□□□ -1.01
TARDBP-217ENST00000616545 NDUFB4O95168 129 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 BCL2P10415 239 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 EDN2P20800 178 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 CCL20P78556 96 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 NDUFA5Q16718 116 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 DCANP1Q8TF63 244 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 BLNKQ8WV28 456 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 C16orf92Q96LL3 132 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 FAM110AQ9BQ89 295 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 WNK1Q9H4A3 2382 aa8.77□□□□□ -1.01
TARDBP-217ENST00000616545 SERTM2A0A1B0GWG4 89 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 SOCS3O14543 225 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 PDE6DO43924 150 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 PAGE4O60829 102 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 CSN1S1P47710 185 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 RANP62826 216 aaKnown RBP8.76□□□□□ -1.01
TARDBP-217ENST00000616545 MEF2BQ02080 365 aaPredicted RBP8.76□□□□□ -1.01
TARDBP-217ENST00000616545 PEA15Q15121 130 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 ZNF506Q5JVG8 444 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 CST9LP1Q5W188 147 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 C5orf17Q8NAS9 161 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 CMTM2Q8TAZ6 248 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 RPUSD4Q96CM3 377 aaKnown RBP8.76□□□□□ -1.01
TARDBP-217ENST00000616545 C17orf77Q96MU5 243 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 Q9H3A6 140 aa8.76□□□□□ -1.01
TARDBP-217ENST00000616545 LOC102723971A0A1B0GUV8 181 aa8.75□□□□□ -1.01
TARDBP-217ENST00000616545 PGPA6NDG6 321 aa8.75□□□□□ -1.01
TARDBP-217ENST00000616545 FBLL1A6NHQ2 334 aaKnown RBP8.75□□□□□ -1.01
TARDBP-217ENST00000616545 C11orf94C9JXX5 98 aa8.75□□□□□ -1.01
TARDBP-217ENST00000616545 SUMO1P63165 101 aaKnown RBP8.75□□□□□ -1.01
TARDBP-217ENST00000616545 UQCC3Q6UW78 93 aa8.75□□□□□ -1.01
TARDBP-217ENST00000616545 EIF4E3Q8N5X7 224 aaKnown RBP8.75□□□□□ -1.01
TARDBP-217ENST00000616545 PCNPQ8WW12 178 aaKnown RBP8.75□□□□□ -1.01
TARDBP-217ENST00000616545 HIST1H2BAQ96A08 127 aa8.75□□□□□ -1.01
TARDBP-217ENST00000616545 EIF5A2Q9GZV4 153 aaKnown RBP8.75□□□□□ -1.01
TARDBP-217ENST00000616545 YTHDF2Q9Y5A9 579 aaKnown RBP8.75□□□□□ -1.01
TARDBP-217ENST00000616545 TMEM250H0YL14 139 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 K7EQM0 130 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 SLC17A3O00476 420 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 UBE2G2P60604 165 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 ICAM4Q14773 271 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 PSG3Q16557 428 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 HAGHQ16775 308 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 BEAN1Q3B7T3 259 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 CCDC28AQ8IWP9 274 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 GBGT1Q8N5D6 347 aa8.74□□□□□ -1.01
TARDBP-217ENST00000616545 ZNF256Q9Y2P7 627 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-217ENST00000616545 IGKV3-7A0A075B6H7 116 aa8.73□□□□□ -1.01
TARDBP-217ENST00000616545 TRAV8-2A0A0B4J237 113 aa8.73□□□□□ -1.01
TARDBP-217ENST00000616545 RBAKDNA6NC62 111 aa8.73□□□□□ -1.01
TARDBP-217ENST00000616545 GGTLC3B5MD39 225 aa8.73□□□□□ -1.01
TARDBP-217ENST00000616545 SLC25A5P05141 298 aaKnown RBP8.73□□□□□ -1.01
TARDBP-217ENST00000616545 S100A9P06702 114 aaKnown RBP8.73□□□□□ -1.01
TARDBP-217ENST00000616545 GUCA2BQ16661 112 aa8.73□□□□□ -1.01
TARDBP-217ENST00000616545 WFDC3Q8IUB2 231 aa8.73□□□□□ -1.01
TARDBP-217ENST00000616545 EPDR1Q9UM22 224 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms