RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 C17orf58Q2M2W7 97 aa11.9□□□□□ -0.51
SNPH-203ENST00000614659 IGLV3-9A0A075B6K5 115 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 ZNF726P1Q15940 193 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 DEFB113Q30KQ7 82 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 FAM231DQ6ZW35 169 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 ZNF138P52744 262 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 KLHL30-AS1Q8NEE0 82 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 LINC00477Q96M19 166 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 PLXND1Q9Y4D7 1925 aa11.89□□□□□ -0.51
SNPH-203ENST00000614659 YPEL3P61236 119 aaPredicted RBP11.89□□□□□ -0.51
SNPH-203ENST00000614659 ZNF503-AS2A6NEH8 195 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 C3orf79P0CE67 100 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
SNPH-203ENST00000614659 LAGE3Q14657 143 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 GAGE2BQ13066 116 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 DEFB121Q5J5C9 76 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 C11orf52Q96A22 123 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 SH2D1AO60880 128 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 TMEM219Q86XT9 240 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 NDUFB8O95169 186 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 IGKV1-16P04430 117 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 CD24P25063 80 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
SNPH-203ENST00000614659 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 EREGO14944 169 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 VWC2Q2TAL6 325 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 TMEM14CQ9P0S9 112 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 PI4KAP42356 2102 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 LYZL1Q6UWQ5 148 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 TP53BP1Q12888 1972 aaPredicted RBP11.87□□□□□ -0.51
SNPH-203ENST00000614659 TRAV2A0A0B4J234 112 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 IGHV2-5P01817 119 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 ACACAQ13085 2346 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 IGKV2-40A0A087WW87 121 aaPredicted RBP11.87□□□□□ -0.51
SNPH-203ENST00000614659 A8MWP6 167 aa11.87□□□□□ -0.51
SNPH-203ENST00000614659 IGKV2D-40P01614 121 aaPredicted RBP11.87□□□□□ -0.51
SNPH-203ENST00000614659 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
SNPH-203ENST00000614659 CD7P09564 240 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 PLNP26678 52 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 GUSBP1Q15486 140 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 MPV17L2Q567V2 206 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 C11orf68Q9H3H3 251 aaKnown RBP11.86□□□□□ -0.51
SNPH-203ENST00000614659 DENND4CQ5VZ89 1909 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 UBE2DNLQ8IWF7 75 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 COL4A3Q01955 1670 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 A0A1B0GUS0 222 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 DAZAP2Q15038 168 aaPredicted RBP11.86□□□□□ -0.51
SNPH-203ENST00000614659 C11orf44Q8N8P7 122 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 D6R8Y8 96 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 C20orf144Q9BQM9 153 aa11.86□□□□□ -0.51
SNPH-203ENST00000614659 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 HTN3P15516 51 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 EVI2AP22794 236 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 THAP8Q8NA92 274 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 ERG28Q9UKR5 140 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 LINC00205P59089 165 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 ATXN8Q156A1 80 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 LCN12Q6JVE5 192 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 ZNF562Q6V9R5 426 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 TRAV12-3A0A0B4J271 114 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 CD5LO43866 347 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 LCNL1Q6ZST4 164 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 NOTCH4Q99466 2003 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 HAPLN4Q86UW8 402 aa11.85□□□□□ -0.51
SNPH-203ENST00000614659 FAM110DQ8TAY7 271 aaPredicted RBP11.85□□□□□ -0.51
SNPH-203ENST00000614659 NPIPB5A8MRT5 1133 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 SYS1-DBNDD2H3BUS1 97 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 NAA38Q9BRA0 125 aaKnown RBP11.84□□□□□ -0.51
SNPH-203ENST00000614659 A0A087X0K7 114 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 RP1P56715 2156 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 CACNA1BQ00975 2339 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 PRB3Q04118 309 aaPredicted RBP11.84□□□□□ -0.51
SNPH-203ENST00000614659 C1orf122Q6ZSJ8 110 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 PRORYQ9H606 182 aa11.84□□□□□ -0.51
SNPH-203ENST00000614659 GHRHP01286 108 aa11.83□□□□□ -0.51
SNPH-203ENST00000614659 KAAG1Q9UBP8 84 aa11.83□□□□□ -0.51
SNPH-203ENST00000614659 FAM186AA6NE01 2351 aa11.83□□□□□ -0.52
SNPH-203ENST00000614659 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.83□□□□□ -0.52
SNPH-203ENST00000614659 SPAG8Q99932 426 aaPredicted RBP11.83□□□□□ -0.52
SNPH-203ENST00000614659 DPH3P1Q9H4G8 78 aa11.83□□□□□ -0.52
SNPH-203ENST00000614659 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
SNPH-203ENST00000614659 SMIM27A0A1W2PRY6 76 aa11.83□□□□□ -0.52
SNPH-203ENST00000614659 RPL15P61313 204 aaKnown RBP11.83□□□□□ -0.52
SNPH-203ENST00000614659 KIR3DS1Q14943 382 aa11.83□□□□□ -0.52
SNPH-203ENST00000614659 POLR3KQ9Y2Y1 108 aaPredicted RBP11.83□□□□□ -0.52
SNPH-203ENST00000614659 GAGE12BA1L429 117 aa11.82□□□□□ -0.52
SNPH-203ENST00000614659 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
SNPH-203ENST00000614659 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
SNPH-203ENST00000614659 LINC01619G3V211 115 aa11.82□□□□□ -0.52
SNPH-203ENST00000614659 NCOR1O75376 2440 aa11.82□□□□□ -0.52
SNPH-203ENST00000614659 OBSL1O75147 1896 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms