RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 NDUFB8O95169 186 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 VDAC2P45880 294 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-204ENST00000613228 LEPP41159 167 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 CENPVQ7Z7K6 275 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-204ENST00000613228 C1orf43Q9BWL3 253 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 LIME1Q9H400 295 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 F5H697 171 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 TGFAP01135 160 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 ATXN8Q156A1 80 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 C5orf24Q7Z6I8 188 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 RNF183Q96D59 192 aa7.04□□□□□ -1.28
PDE6A-204ENST00000613228 FGF23Q9GZV9 251 aaPredicted RBP7.04□□□□□ -1.28
PDE6A-204ENST00000613228 ORMDL3Q8N138 153 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 IFI27L1Q96BM0 104 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 ASCL2Q99929 193 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 SIGLEC8Q9NYZ4 499 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 TRAV3A0A0B4J244 114 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 FSTL3O95633 263 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 CMC4P56277 68 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-204ENST00000613228 Q6ZRM9 215 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 TAL2Q16559 108 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 ATP6V0E2Q8NHE4 81 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 BEX4Q9NWD9 120 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-204ENST00000613228 NPIPB5A8MRT5 1133 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 OVOL1O14753 267 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 PAX9P55771 341 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 FAM110DQ8TAY7 271 aaPredicted RBP7.03□□□□□ -1.28
PDE6A-204ENST00000613228 FAM110AQ9BQ89 295 aa7.03□□□□□ -1.28
PDE6A-204ENST00000613228 IGKV1-39P01597 117 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 IGKV1D-39P04432 117 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 CR1LQ2VPA4 569 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 CLEC19AQ6UXS0 136 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 PSG8Q9UQ74 426 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 DAZAP2Q15038 168 aaPredicted RBP7.02□□□□□ -1.29
PDE6A-204ENST00000613228 TDRG1Q3Y452 100 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 C11orf68Q9H3H3 251 aaKnown RBP7.02□□□□□ -1.29
PDE6A-204ENST00000613228 CACNA1CQ13936 2221 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 VWC2Q2TAL6 325 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 SEM1Q6ZVN7 128 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 C18orf15Q96N68 181 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 DUX5Q96PT3 197 aa7.02□□□□□ -1.29
PDE6A-204ENST00000613228 DUSP14O95147 198 aaKnown RBP7.01□□□□□ -1.29
PDE6A-204ENST00000613228 PDE6HQ13956 83 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 ZNF56Q15929 161 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 RPP25LQ8N5L8 163 aaKnown RBP7.01□□□□□ -1.29
PDE6A-204ENST00000613228 RFNGQ9Y644 331 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 IGHV3OR16-10A0A075B7F0 116 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 IGHV4-39P01824 125 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 PAX8Q06710 450 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 THAP8Q8NA92 274 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 PTH2Q96A98 100 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 YPEL4Q96NS1 127 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 SLC25A39Q9BZJ4 359 aaPredicted RBP7.01□□□□□ -1.29
PDE6A-204ENST00000613228 CABIN1Q9Y6J0 2220 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 FREM3P0C091 2139 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 ARID1BQ8NFD5 2236 aaPredicted RBP7.01□□□□□ -1.29
PDE6A-204ENST00000613228 SPTBP11277 2137 aa7.01□□□□□ -1.29
PDE6A-204ENST00000613228 TRAV40A0A0B4J280 105 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 H3BUA1 57 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 RP1P56715 2156 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 ZNF114Q8NC26 417 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
PDE6A-204ENST00000613228 MGPP08493 103 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 WFDC3Q8IUB2 231 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 TRIOBPQ9H2D6 2365 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 NDUFC2O95298 119 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 OR11H6Q8NGC7 330 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 SCRT2Q9NQ03 307 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 MSMBP08118 114 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 TMEM14CQ9P0S9 112 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 PHLDA3Q9Y5J5 127 aa7□□□□□ -1.29
PDE6A-204ENST00000613228 IGHV1-69DA0A0B4J2H0 117 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 INS-IGF2F8WCM5 200 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 H3BMM0 161 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 IGHV1-69P01742 117 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 UBE2WQ96B02 151 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 H3BMG7 143 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 GATA2P23769 480 aaPredicted RBP6.99□□□□□ -1.29
PDE6A-204ENST00000613228 CEND1Q8N111 149 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 SHANK2-AS3Q9BTD1 123 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 FABP5P3A8MUU1 101 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 K7EM74 188 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 C9orf139Q6ZV77 190 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 BPESC1Q9GZL8 116 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 PRORYQ9H606 182 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 DOCK9Q9BZ29 2069 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 SNRNP200O75643 2136 aaKnown RBP6.99□□□□□ -1.29
PDE6A-204ENST00000613228 NDUFA3O95167 84 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 IGKV1-16P04430 117 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 KLF5Q13887 457 aaPredicted RBP6.99□□□□□ -1.29
PDE6A-204ENST00000613228 C2orf82Q6UX34 121 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 SIGLEC15Q6ZMC9 328 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 HAPLN4Q86UW8 402 aa6.99□□□□□ -1.29
PDE6A-204ENST00000613228 A0A1W2PPI3 338 aa6.98□□□□□ -1.29
PDE6A-204ENST00000613228 F2Z2F3 143 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms