RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TIMM23O14925 209 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 PRTN3P24158 256 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 LMO4P61968 165 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 FAM19A2Q8N3H0 131 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 GTSF1Q8WW33 167 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 PIMREGQ9BSJ6 248 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 LPAR2Q9HBW0 351 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 RNF24Q9Y225 148 aa11.59□□□□□ -0.55
CDH1-213ENST00000612417 A0A1W2PRD5 423 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 A0A1W2PRF3 423 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 A0A1W2PRM7 423 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 IGLV2-11P01706 119 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 HTR1DP28221 377 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 CAMPP49913 170 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 TCF24Q7RTU0 167 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 NPBQ8NG41 125 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 CFHR4Q92496 578 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 NRGNQ92686 78 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 BORCS7Q96B45 105 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 SSBP4Q9BWG4 385 aaPredicted RBP11.58□□□□□ -0.56
CDH1-213ENST00000612417 VPS13CQ709C8 3753 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 H3BTX0 84 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 NBR2O15453 112 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 HSBP1O75506 76 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 NDUFA3O95167 84 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
CDH1-213ENST00000612417 VMO1Q7Z5L0 202 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 SHANK2-AS3Q9BTD1 123 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 DPM3Q9P2X0 92 aa11.58□□□□□ -0.56
CDH1-213ENST00000612417 H3BRN7 92 aa11.57□□□□□ -0.56
CDH1-213ENST00000612417 NTF3P20783 257 aa11.57□□□□□ -0.56
CDH1-213ENST00000612417 FAM162BQ5T6X4 162 aa11.57□□□□□ -0.56
CDH1-213ENST00000612417 C1orf122Q6ZSJ8 110 aa11.57□□□□□ -0.56
CDH1-213ENST00000612417 KIR3DL3Q8N743 410 aa11.57□□□□□ -0.56
CDH1-213ENST00000612417 DAZAP1Q96EP5 407 aaKnown RBP11.57□□□□□ -0.56
CDH1-213ENST00000612417 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
CDH1-213ENST00000612417 IGHV2-70DA0A0C4DH43 119 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 CNIH1O95406 144 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 SPATA45Q537H7 98 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 BPIFA4PQ86YQ2 179 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 LYPD1Q8N2G4 141 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 C20orf202A1L168 122 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 FAM181BA6NEQ2 426 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 ODF3BA8MYP8 253 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 IGLC2P0DOY2 106 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 CEACAM3P40198 252 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 PMCHL1Q16048 86 aa11.56□□□□□ -0.56
CDH1-213ENST00000612417 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
CDH1-213ENST00000612417 EXOC3-AS1Q8N2X6 119 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 TMEM75Q8N9X5 138 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 C10orf105Q8TEF2 133 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 ZNF48Q96MX3 618 aaPredicted RBP11.55□□□□□ -0.56
CDH1-213ENST00000612417 KMT2BQ9UMN6 2715 aaPredicted RBP11.55□□□□□ -0.56
CDH1-213ENST00000612417 CELSR2Q9HCU4 2923 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 TRAV8-1A0A0A6YYK1 113 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 M0R2Z0 102 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 TOX4O94842 621 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 COL8A1P27658 744 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 GOLT1AQ6ZVE7 132 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 ZNF491Q8N8L2 437 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 OR4F17Q8NGA8 305 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 PGLYRP4Q96LB8 373 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 UQCR10Q9UDW1 63 aa11.55□□□□□ -0.56
CDH1-213ENST00000612417 WI2-2373I1.2A0A1W2PRP0 233 aa11.54□□□□□ -0.56
CDH1-213ENST00000612417 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
CDH1-213ENST00000612417 APOHP02749 345 aaPredicted RBP11.54□□□□□ -0.56
CDH1-213ENST00000612417 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
CDH1-213ENST00000612417 RNASEKQ6P5S7 137 aaKnown RBP11.54□□□□□ -0.56
CDH1-213ENST00000612417 SIGLEC15Q6ZMC9 328 aa11.54□□□□□ -0.56
CDH1-213ENST00000612417 CIARTQ8N365 385 aaPredicted RBP11.54□□□□□ -0.56
CDH1-213ENST00000612417 RNF125Q96EQ8 232 aa11.54□□□□□ -0.56
CDH1-213ENST00000612417 URB1-AS1Q96HZ7 61 aa11.54□□□□□ -0.56
CDH1-213ENST00000612417 CSTL1Q9H114 145 aa11.54□□□□□ -0.56
CDH1-213ENST00000612417 ANKRD17O75179 2603 aaKnown RBP11.54□□□□□ -0.56
CDH1-213ENST00000612417 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 C2orf70A6NJV1 201 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 HAX1O00165 279 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 C5orf64Q2M2E5 130 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 COL5A1-AS1Q5SY13 56 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 CHCHD1Q96BP2 118 aaKnown RBP11.53□□□□□ -0.56
CDH1-213ENST00000612417 SIRPDQ9H106 197 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 USP9YO00507 2555 aaPredicted RBP11.53□□□□□ -0.56
CDH1-213ENST00000612417 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 NPIPB5A8MRT5 1133 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 HLA-DRB1P01911 266 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 EBLN2Q6P2I7 272 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 S100A7AQ86SG5 101 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 PRNTQ86SH4 94 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 KLHDC1Q8N7A1 406 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 NDFIP1Q9BT67 221 aa11.53□□□□□ -0.56
CDH1-213ENST00000612417 ZNF785A8K8V0 405 aa11.52□□□□□ -0.57
CDH1-213ENST00000612417 PDE6HQ13956 83 aa11.52□□□□□ -0.57
CDH1-213ENST00000612417 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 LOC102724200A0A096LPH7 203 aaPredicted RBP11.51□□□□□ -0.57
CDH1-213ENST00000612417 K7EQM0 130 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 IL4P05112 153 aa11.51□□□□□ -0.57
CDH1-213ENST00000612417 FAM120AOSQ5T036 256 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms