RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 FXYD7P58549 80 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 EWSR1Q01844 656 aaKnown RBP eCLIP8.97□□□□□ -0.97
CBWD3-208ENST00000612050 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 MIC13Q5XKP0 118 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 Q8NAQ8 132 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 PPP1R1CQ8WVI7 109 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 C11orf1Q9H5F2 150 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 PXMP4Q9Y6I8 212 aa8.97□□□□□ -0.97
CBWD3-208ENST00000612050 F6UB75 175 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 INSP01308 110 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 IFNA5P01569 189 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 HBE1P02100 147 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 GIG44P09565 113 aaPredicted RBP8.96□□□□□ -0.98
CBWD3-208ENST00000612050 TCTAP57738 103 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 NANOS2P60321 138 aaKnown RBP8.96□□□□□ -0.98
CBWD3-208ENST00000612050 OPCMLQ14982 345 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 PSG3Q16557 428 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 PATE2Q6UY27 113 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 RNF182Q8N6D2 247 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 CSNK1G2-AS1Q8NCQ2 148 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 SCGB1C1Q8TD33 95 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 C2CD4CQ8TF44 421 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 CHAC2Q8WUX2 184 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 NEU1Q99519 415 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 PGPEP1Q9NXJ5 209 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 RFNGQ9Y644 331 aa8.96□□□□□ -0.98
CBWD3-208ENST00000612050 CXCL3P19876 107 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 CNN1P51911 297 aaKnown RBP8.95□□□□□ -0.98
CBWD3-208ENST00000612050 HIST1H1AQ02539 215 aaPredicted RBP8.95□□□□□ -0.98
CBWD3-208ENST00000612050 NHLH2Q02577 135 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 CLINT1Q14677 625 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 OR10J6PQ8NGY7 276 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 THAP6Q8TBB0 222 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 TMEM37Q8WXS4 190 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 C20orf173Q96LM9 149 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 NPCDR1Q9BY65 106 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 SLC35B3Q9H1N7 401 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 OR5AC2Q9NZP5 309 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 X6R8D5 127 aa8.95□□□□□ -0.98
CBWD3-208ENST00000612050 MPC2O95563 127 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 H2BFSP57053 126 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 DEFB1P60022 68 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 RRN3P1Q2M238 152 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 IGFL4Q6B9Z1 124 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 OR8A1Q8NGG7 326 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 RPUSD4Q96CM3 377 aaKnown RBP8.94□□□□□ -0.98
CBWD3-208ENST00000612050 IGF2BP2-AS1Q96M15 143 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 TIMM9Q9Y5J7 89 aa8.94□□□□□ -0.98
CBWD3-208ENST00000612050 TRAV10A0A0B4J240 114 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 BOLA2-SMG1P6H3BVE0 249 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 LY6G6CO95867 125 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 SPART-AS1P0CW21 52 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 RBMY1A1P0DJD3 496 aaKnown RBP8.93□□□□□ -0.98
CBWD3-208ENST00000612050 RBMY1CP0DJD4 496 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 TSPOP30536 169 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 RBMY1FQ15415 496 aaKnown RBP8.93□□□□□ -0.98
CBWD3-208ENST00000612050 ZNF705AQ6ZN79 300 aaPredicted RBP8.93□□□□□ -0.98
CBWD3-208ENST00000612050 ATP5SQ99766 215 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 MED28Q9H204 178 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 AAMDCQ9H7C9 122 aa8.93□□□□□ -0.98
CBWD3-208ENST00000612050 ZNF331Q9NQX6 463 aaPredicted RBP8.93□□□□□ -0.98
CBWD3-208ENST00000612050 TRAV8-2A0A0B4J237 113 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 ZNF705FA8MVS1 300 aaPredicted RBP8.92□□□□□ -0.98
CBWD3-208ENST00000612050 ZNF705DP0CH99 300 aaPredicted RBP8.92□□□□□ -0.98
CBWD3-208ENST00000612050 ZNF705BP0CI00 300 aaPredicted RBP8.92□□□□□ -0.98
CBWD3-208ENST00000612050 HLA-DMBP28068 263 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 RPL12P30050 165 aaKnown RBP8.92□□□□□ -0.98
CBWD3-208ENST00000612050 EMP1P54849 157 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 SPINK13Q1W4C9 94 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 TMEM256Q8N2U0 113 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 OR11H7Q8NGC8 314 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 MRPL32Q9BYC8 188 aaKnown RBP8.92□□□□□ -0.98
CBWD3-208ENST00000612050 WDR61Q9GZS3 305 aaKnown RBP8.92□□□□□ -0.98
CBWD3-208ENST00000612050 PRELID1Q9Y255 219 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 HSPB11Q9Y547 144 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
CBWD3-208ENST00000612050 ZNF253O75346 499 aa8.91□□□□□ -0.98
CBWD3-208ENST00000612050 ASB13Q8WXK3 278 aa8.91□□□□□ -0.98
CBWD3-208ENST00000612050 TMEM14CQ9P0S9 112 aa8.91□□□□□ -0.98
CBWD3-208ENST00000612050 MBD2Q9UBB5 411 aa8.91□□□□□ -0.98
CBWD3-208ENST00000612050 DNAH7Q8WXX0 4024 aa8.91□□□□□ -0.98
CBWD3-208ENST00000612050 LOC102723971A0A1B0GUV8 181 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 A8MTW9 85 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 IGLL5B9A064 214 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 M0R2Z0 102 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 MRPS12O15235 138 aaKnown RBP8.9□□□□□ -0.98
CBWD3-208ENST00000612050 IGLC2P0DOY2 106 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 HIST1H1EP10412 219 aaKnown RBP8.9□□□□□ -0.98
CBWD3-208ENST00000612050 CDKN1BP46527 198 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 TAS2R45P59539 299 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 PDE6HQ13956 83 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 LINC00476Q8WZB0 136 aa8.9□□□□□ -0.98
CBWD3-208ENST00000612050 TRAV5A0A0B4J249 113 aa8.89□□□□□ -0.99
CBWD3-208ENST00000612050 H0YIZ8 118 aa8.89□□□□□ -0.99
CBWD3-208ENST00000612050 SNRPCP09234 159 aaKnown RBP8.89□□□□□ -0.99
CBWD3-208ENST00000612050 ZNF266Q14584 549 aa8.89□□□□□ -0.99
CBWD3-208ENST00000612050 RGS21Q2M5E4 152 aa8.89□□□□□ -0.99
CBWD3-208ENST00000612050 MRPL53Q96EL3 112 aaKnown RBP8.89□□□□□ -0.99
CBWD3-208ENST00000612050 C17orf77Q96MU5 243 aa8.89□□□□□ -0.99
CBWD3-208ENST00000612050 LINC01587Q99440 93 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms