RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 A0A1B0GWB2 263 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 E7EQL1 145 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 CEACAM4O75871 244 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 CD7P09564 240 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 ATP5IP56385 69 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 CD300EQ496F6 205 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 UTF1Q5T230 341 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 LYPD6BQ8NI32 183 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 C18orf32Q8TCD1 76 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 C5orf30Q96GV9 206 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 RITA1Q96K30 269 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TMEM14BQ9NUH8 114 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TRAV26-2A0A0B4J265 109 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 FABP5P3A8MUU1 101 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 DKK1O94907 266 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 HBDP02042 147 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TMEM30BQ3MIR4 351 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 FAM106AQ4KMX7 169 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 CENPVQ7Z7K6 275 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 C11orf53Q8IXP5 236 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 MAPK1IP1LQ8NDC0 245 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TMEM167AQ8TBQ9 72 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 C2orf88Q9BSF0 95 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 DMXL2Q8TDJ6 3036 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TTC28Q96AY4 2481 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 SYS1-DBNDD2H3BUS1 97 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 THBDP07204 575 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 KLRB1Q12918 225 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 ITLN2Q8WWU7 325 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 IFI27L1Q96BM0 104 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 ZC2HC1AQ96GY0 325 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 LINC00477Q96M19 166 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 KIR2DL4Q99706 377 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 ALPK3Q96L96 1907 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 FREM1Q5H8C1 2179 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 A0A1B0GWJ7 208 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 A0A1W2PNU3 283 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 MBD3L4A6NDZ8 208 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 MBD3L3A6NE82 208 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 MBD3L5A6NJ08 208 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 IGHG3P01860 377 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 LMO1P25800 156 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 VWC2Q2TAL6 325 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TMEM249Q2WGJ8 235 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 RUSC1-AS1Q66K80 236 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TMEM75Q8N9X5 138 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 MBD3L2Q8NHZ7 208 aaPredicted RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 ABCA4P78363 2273 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 KIAA1549LQ6ZVL6 1849 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 A0A1B0GV72 72 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 IGLV2-14P01704 120 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 GRNP28799 593 aaKnown RBP3.06□□□□□ -1.92
RNF38-210ENST00000611646 TPTE2P1Q5T6R2 138 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 PVRIGQ6DKI7 326 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 Q86TA4 180 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 TTC9CQ8N5M4 171 aa3.06□□□□□ -1.92
RNF38-210ENST00000611646 G3V318 75 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 IGHV4-39P01824 125 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 HLA-DMBP28068 263 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 PSG3Q16557 428 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 CRIP3Q6Q6R5 217 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 C14orf178Q8N769 122 aaPredicted RBP3.05□□□□□ -1.92
RNF38-210ENST00000611646 SYT8Q8NBV8 401 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 DDB2Q92466 427 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 ASH1LQ9NR48 2969 aaKnown RBP3.05□□□□□ -1.92
RNF38-210ENST00000611646 NDUFA4L2Q9NRX3 87 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 AKAP9Q99996 3911 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 NOTCH3Q9UM47 2321 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 NUP210Q8TEM1 1887 aaPredicted RBP3.05□□□□□ -1.92
RNF38-210ENST00000611646 A0A087WWL8 130 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 TRAV12-3A0A0B4J271 114 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 TMEM238LA0A1B0GVL6 79 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 A6NJY4 79 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 K7EMI3 77 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 IGKCP01834 107 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 LYRM7Q5U5X0 104 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 PET117Q6UWS5 81 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 ORAOV1Q8WV07 137 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 FAM215AQ9Y5M1 114 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 SOX21Q9Y651 276 aaPredicted RBP3.05□□□□□ -1.92
RNF38-210ENST00000611646 DENND4AQ7Z401 1863 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 IGLL1P15814 213 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 SNRPD3P62318 126 aaKnown RBP3.05□□□□□ -1.92
RNF38-210ENST00000611646 SIGLEC15Q6ZMC9 328 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 NEGR1Q7Z3B1 354 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 BCL6BQ8N143 479 aaPredicted RBP3.05□□□□□ -1.92
RNF38-210ENST00000611646 BEND2Q8NDZ0 799 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 TMEM158Q8WZ71 300 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 CHCHD1Q96BP2 118 aaKnown RBP3.05□□□□□ -1.92
RNF38-210ENST00000611646 TRGV9Q99603 122 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 PRR14LQ5THK1 2151 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 DOPEY2Q9Y3R5 2298 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 IGHV1-24A0A0C4DH33 117 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 PAX8Q06710 450 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 SMAGPQ0VAQ4 97 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 PSMG4Q5JS54 123 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 MEIG1Q5JSS6 88 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 LINC00173Q6ZV60 143 aa3.05□□□□□ -1.92
RNF38-210ENST00000611646 IL17RELQ6ZVW7 336 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms