RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 D6R8Y8 96 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 CSN1S1P47710 185 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 ARL6IP6Q8N6S5 226 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 TMEM75Q8N9X5 138 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 PEF1Q9UBV8 284 aaKnown RBP11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 IGHV1-3A0A0C4DH29 117 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 THBDP07204 575 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 RBPJQ06330 500 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 BCL6BQ8N143 479 aaPredicted RBP11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 INSIG2Q9Y5U4 225 aa11.94□□□□□ -0.5
PCDHGB1-202ENST00000611598 SERTM2A0A1B0GWG4 89 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 PAX2Q02962 417 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 PSG3Q16557 428 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 TMEM97Q5BJF2 176 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 GATD1Q8NB37 220 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 NAA38Q9BRA0 125 aaKnown RBP11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 SHANK2-AS3Q9BTD1 123 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 SIGLEC8Q9NYZ4 499 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 S4R3C0 116 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 TRBV6-1A0A0K0K1D8 114 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 AMN1Q8IY45 258 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
PCDHGB1-202ENST00000611598 A0A1W2PRD5 423 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 A0A1W2PRF3 423 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 A0A1W2PRM7 423 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 C16orf97H3BN30 126 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 SCNM1Q9BWG6 230 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 A0A0G2JNJ9 132 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 H3BRN7 92 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 K7EIM0 57 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 IGLV1-47P01700 117 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 LYZL1Q6UWQ5 148 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 IGFBPL1Q8WX77 278 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 JMJD8Q96S16 334 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 Q9UFV3 132 aa11.92□□□□□ -0.5
PCDHGB1-202ENST00000611598 SAP30O75446 220 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 COX7A1P24310 79 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 NHLH1Q02575 133 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 Q6ZS92 163 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 PIP4P1Q86T03 277 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 APOBEC3AP31941 199 aaPredicted RBP11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 CACNG7P62955 275 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 PLGLAQ15195 96 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 ASCL5Q7RTU5 278 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 FAM57AQ8TBR7 257 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 RNASE6Q93091 150 aaKnown RBP11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 SH3BGRL2Q9UJC5 107 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 HILPDAQ9Y5L2 63 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 ZGRF1Q86YA3 2104 aa11.91□□□□□ -0.5
PCDHGB1-202ENST00000611598 BUB1B-PAK6H3BSN5 160 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 IL4P05112 153 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 ZNF491Q8N8L2 437 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 ZNF414Q96IQ9 312 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 KAAG1Q9UBP8 84 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 MRPS12O15235 138 aaKnown RBP11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 SEC11AP67812 179 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 IGFL3Q6UXB1 125 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 ZNF493Q6ZR52 646 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 PRELID3AQ96N28 172 aa11.9□□□□□ -0.5
PCDHGB1-202ENST00000611598 SMKR1H3BMG3 65 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 K7EQM0 130 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 FCGR2BP31994 310 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 KLF17Q5JT82 389 aaPredicted RBP11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 RNF125Q96EQ8 232 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 DYNLRB1Q9NP97 96 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 OTOGLQ3ZCN5 2332 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 A0A1B0GW15 77 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 GAGE10A6NGK3 116 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 LYNX1G3V0Z9 82 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 LYNX1P0DP58 116 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 S100A7P31151 101 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 FAM104BQ5XKR9 115 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 THYN1Q9P016 225 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 POLEQ07864 2286 aa11.89□□□□□ -0.51
PCDHGB1-202ENST00000611598 CNIH1O95406 144 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 WFDC3Q8IUB2 231 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 H3BUT2 72 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 CT45A10P0DMU9 189 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 TCF15Q12870 199 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 MRPL51Q4U2R6 128 aaKnown RBP11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 Q6AWC8 147 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 UFSP1Q6NVU6 142 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 PRSS57Q6UWY2 283 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 BOD1L2Q8IYS8 172 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 U3KQK5 164 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 GVINP1Q7Z2Y8 2422 aa11.88□□□□□ -0.51
PCDHGB1-202ENST00000611598 SH2D1AO60880 128 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 LGALS9BQ3B8N2 356 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 LGALS9CQ6DKI2 356 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 ORMDL3Q8N138 153 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 RPEQ96AT9 228 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 MEGF9Q9H1U4 602 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 AKAP13Q12802 2813 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 IGKV2-40A0A087WW87 121 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 TMEM189A5PLL7 270 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 IGKV2D-40P01614 121 aaPredicted RBP11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 PCP2Q8IVA1 136 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 MUC6Q6W4X9 2439 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 APC2O95996 2303 aa11.87□□□□□ -0.51
PCDHGB1-202ENST00000611598 C9orf118A6NHY6 69 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms