RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 KCNRGQ8N5I3 272 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 OR11H4Q8NGC9 324 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 OR2G3Q8NGZ4 309 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 C17orf77Q96MU5 243 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 ARPC5LQ9BPX5 153 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 TM2D3Q9BRN9 247 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 SLC50A1Q9BRV3 221 aa10.54□□□□□ -0.72
CTSA-211ENST00000606066 A0A1W2PPV4 95 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 IGLC2P0DOY2 106 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 SPATA31B1PQ5VZV4 182 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 EBLN2Q6P2I7 272 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 CSTL1Q9H114 145 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 CLEC5AQ9NY25 188 aa10.53□□□□□ -0.72
CTSA-211ENST00000606066 BIRC6Q9NR09 4857 aa10.52□□□□□ -0.72
CTSA-211ENST00000606066 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.73
CTSA-211ENST00000606066 KNCNA6PVL3 124 aa10.52□□□□□ -0.73
CTSA-211ENST00000606066 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.73
CTSA-211ENST00000606066 OR10G4Q8NGN3 311 aa10.52□□□□□ -0.73
CTSA-211ENST00000606066 OR10G9Q8NGN4 311 aa10.52□□□□□ -0.73
CTSA-211ENST00000606066 OR10G7Q8NGN6 311 aa10.52□□□□□ -0.73
CTSA-211ENST00000606066 SLC25A2Q9BXI2 301 aa10.52□□□□□ -0.73
CTSA-211ENST00000606066 OR51M1Q9H341 326 aa10.52□□□□□ -0.73
CTSA-211ENST00000606066 DNAH7Q8WXX0 4024 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 HUWE1Q7Z6Z7 4374 aaKnown RBP10.51□□□□□ -0.73
CTSA-211ENST00000606066 TRAV8-2A0A0B4J237 113 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 H3BQ15 152 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 ZNF253O75346 499 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 C1QBP02746 253 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 SPP1P10451 314 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 NUTF2P61970 127 aaKnown RBP10.51□□□□□ -0.73
CTSA-211ENST00000606066 PDE6HQ13956 83 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 KHDC3LQ587J8 217 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
CTSA-211ENST00000606066 TRPT1Q86TN4 253 aaKnown RBP10.51□□□□□ -0.73
CTSA-211ENST00000606066 FAM167A-AS1Q96KT0 104 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 HYLS1Q96M11 299 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 PAXXQ9BUH6 204 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 SAV1Q9H4B6 383 aaPredicted RBP10.51□□□□□ -0.73
CTSA-211ENST00000606066 ZNF331Q9NQX6 463 aaPredicted RBP10.51□□□□□ -0.73
CTSA-211ENST00000606066 CYTL1Q9NRR1 136 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 RFNGQ9Y644 331 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 U3KQK5 164 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
CTSA-211ENST00000606066 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
CTSA-211ENST00000606066 TRBV19A0A075B6N1 114 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 H3BMM0 161 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 BCL2L11O43521 198 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 OR7C2O60412 319 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 PFDN1O60925 122 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 SNRPCP09234 159 aaKnown RBP10.5□□□□□ -0.73
CTSA-211ENST00000606066 RAB2AP61019 212 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 EIF5AP63241 154 aaKnown RBP10.5□□□□□ -0.73
CTSA-211ENST00000606066 PSG9Q00887 426 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 PSG3Q16557 428 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 TMEM41BQ5BJD5 291 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 IGFL4Q6B9Z1 124 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 Q6ZWC4 215 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 ZNF738Q8NE65 137 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 SAT2Q96F10 170 aaPredicted RBP10.5□□□□□ -0.73
CTSA-211ENST00000606066 C20orf173Q96LM9 149 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 SH3BGRL3Q9H299 93 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 ZNF586Q9NXT0 402 aa10.5□□□□□ -0.73
CTSA-211ENST00000606066 DNAH1Q9P2D7 4330 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 H3BTX0 84 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 DUSP14O95147 198 aaKnown RBP10.49□□□□□ -0.73
CTSA-211ENST00000606066 NBEAP1P0C6P0 100 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 PYYP10082 97 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 FAM122CQ6P4D5 195 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 TMUB2Q71RG4 321 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 RNF182Q8N6D2 247 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 CLUHP3Q96NS8 147 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 RCHY1Q96PM5 261 aa10.49□□□□□ -0.73
CTSA-211ENST00000606066 ZNF471Q9BX82 626 aaPredicted RBP10.49□□□□□ -0.73
CTSA-211ENST00000606066 A0A0J9YX75 114 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 A0A1B0GVG6 124 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 CA1P00915 261 aaPredicted RBP10.48□□□□□ -0.73
CTSA-211ENST00000606066 CDC34P49427 236 aaPredicted RBP10.48□□□□□ -0.73
CTSA-211ENST00000606066 AKR1C8PQ5T2L2 129 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 PQLC2Q6ZP29 291 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 OR4B1Q8NGF8 309 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 BLNKQ8WV28 456 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 FXYD5Q96DB9 178 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 ACTR3CQ9C0K3 210 aaPredicted RBP10.48□□□□□ -0.73
CTSA-211ENST00000606066 AAMDCQ9H7C9 122 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
CTSA-211ENST00000606066 F6UB75 175 aa10.47□□□□□ -0.73
CTSA-211ENST00000606066 SLC17A3O00476 420 aa10.47□□□□□ -0.73
CTSA-211ENST00000606066 OR10J4P0C629 311 aa10.47□□□□□ -0.73
CTSA-211ENST00000606066 C4BPBP20851 252 aa10.47□□□□□ -0.73
CTSA-211ENST00000606066 HLA-DMBP28068 263 aa10.47□□□□□ -0.73
CTSA-211ENST00000606066 UBE2L3P68036 154 aaKnown RBP10.47□□□□□ -0.73
CTSA-211ENST00000606066 GDF5OSQ5U4N7 250 aa10.47□□□□□ -0.73
CTSA-211ENST00000606066 RPP25LQ8N5L8 163 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms