RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	IGLV3-19	P01714	112 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	CARD19	Q96LW7	228 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	NDUFA12	Q9UI09	145 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216		A0A087WV48	116 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	TINCR	A0A1B0GVN0	87 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	PFN1	P07737	140 aa	Known RBP	13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	SPINK13	Q1W4C9	94 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	ZNF492	Q9P255	531 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	GAGE7	O76087	117 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	GAGE12F	P0CL80	117 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	GAGE12G	P0CL81	117 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	GAGE12I	P0CL82	117 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	ZNRF2	Q8NHG8	242 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	MDC1	Q14676	2089 aa	Known RBP	13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	TMEM213	A2RRL7	107 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	ZNF664	Q8N3J9	261 aa		13.85	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	CFHR2	P36980	270 aa		13.84	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	RNASE2	P10153	161 aa	Known RBP	13.84	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	PAX9	P55771	341 aa		13.84	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	HLA-DRB4	P13762	266 aa		13.84	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	HLA-DRB4	X5D2U9	266 aa		13.84	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	GATA4	P43694	442 aa		13.84	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	IGHV1OR15-1	A0A075B7D0	117 aa		13.83	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	PYY3	Q5JQD4	70 aa		13.83	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	ANKRD29	Q8N6D5	301 aa		13.83	□□□□□ -0.19
ZSWIM8-223	ENST00000605216	SAA4	P35542	130 aa		13.83	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	LINC00473	A8K010	186 aa		13.83	□□□□□ -0.2
ZSWIM8-223	ENST00000605216		Q0VG73	95 aa		13.83	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	GFI1	Q99684	422 aa		13.83	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	IGKV1-27	A0A075B6S5	117 aa		13.83	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	HS3ST6	Q96QI5	342 aa		13.83	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	NDUFB8	O95169	186 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	MDS2	Q8NDY4	140 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	CRYGC	P07315	174 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	FAM104B	Q5XKR9	115 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	C8orf49	Q96NF6	230 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	C15orf62	A8K5M9	175 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	IGHV3-38	A0A0C4DH36	116 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	SDHAF1	A6NFY7	115 aa		13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.82	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	MST1L	Q2TV78	715 aa		13.81	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	PRO1854	Q9UHT4	67 aa		13.81	□□□□□ -0.2
ZSWIM8-223	ENST00000605216		J3QRE1	110 aa		13.81	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	LYPD3	O95274	346 aa		13.81	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	CSRP3	P50461	194 aa		13.81	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	HERVK_113	P63121	156 aa		13.81	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	TRBV6-6	A0A0A6YYG2	114 aa		13.81	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	SHANK3	Q9BYB0	1731 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	UNC13C	Q8NB66	2214 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	SHISA9	B4DS77	424 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	CRYBA4	P53673	196 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	GAS1	P54826	345 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	GGN	Q86UU5	652 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	TMEM105	Q8N8V8	129 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216		A0A1W2PPI3	338 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	ZFP36L1	Q07352	338 aa	Known RBP	13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	TEX48	A0A1B0GUV7	120 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	PKIG	Q9Y2B9	76 aa		13.8	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	ANG	P03950	147 aa	Known RBP	13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	DEFB105A	Q8NG35	78 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	IGHV1-24	A0A0C4DH33	117 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216		K7EP34	96 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	GATA3	P23771	443 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	MYO16	Q9Y6X6	1858 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	COL8A2	P25067	703 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	NTN3	O00634	580 aa	Predicted RBP	13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	BPESC1	Q9GZL8	116 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	GLI3	P10071	1580 aa		13.79	□□□□□ -0.2
ZSWIM8-223	ENST00000605216		A0A0G2JNJ9	132 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	LINC00479	Q96M42	142 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216		Q9UFV3	132 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	ETDB	Q3ZM63	59 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216		Q6P435	159 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	FOCAD	Q5VW36	1801 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	CFP	P27918	469 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	PRSS57	Q6UWY2	283 aa		13.78	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	BCOR	Q6W2J9	1755 aa		13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	ATP6V0E1	O15342	81 aa		13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	YPEL3	P61236	119 aa	Predicted RBP	13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	ADAMTSL3	P82987	1691 aa		13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	RUSC1-AS1	Q66K80	236 aa		13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	LYPD2	Q6UXB3	125 aa		13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	C18orf32	Q8TCD1	76 aa		13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	C20orf144	Q9BQM9	153 aa		13.77	□□□□□ -0.2
ZSWIM8-223	ENST00000605216	MLANA	Q16655	118 aa		13.77	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	NDUFS6	O75380	124 aa	Known RBP	13.77	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	CEND1	Q8N111	149 aa		13.77	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	ATP6V0B	Q99437	205 aa		13.77	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	OTOF	Q9HC10	1997 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	IGKV1D-17	A0A075B6S4	117 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	CDKN1B	P46527	198 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	NDUFC2	O95298	119 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	HLA-DMB	P28068	263 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	MRPL51	Q4U2R6	128 aa	Known RBP	13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	WFDC9	Q8NEX5	89 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	IGF2BP2-AS1	Q96M15	143 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	ORMDL1	Q9P0S3	153 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	TRAV26-2	A0A0B4J265	109 aa		13.76	□□□□□ -0.21
ZSWIM8-223	ENST00000605216	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms