RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 SRP19P09132 144 aaKnown RBP13.24□□□□□ -0.29
DDX49-213ENST00000602113 MYCNOSP40205 109 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 GALR1P47211 349 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 CCDC28AQ8IWP9 274 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 SMDT1Q9H4I9 107 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 FBN1P35555 2871 aaKnown RBP13.24□□□□□ -0.29
DDX49-213ENST00000602113 A0A087X0K7 114 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 ZNF785A8K8V0 405 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 FOLR2P14207 255 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 ATF4P18848 351 aaPredicted RBP13.24□□□□□ -0.29
DDX49-213ENST00000602113 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 ELOVL1Q9BW60 279 aa13.24□□□□□ -0.29
DDX49-213ENST00000602113 CSN3P07498 182 aa13.23□□□□□ -0.29
DDX49-213ENST00000602113 SUMO1P63165 101 aaKnown RBP13.23□□□□□ -0.29
DDX49-213ENST00000602113 Q9H3A6 140 aa13.23□□□□□ -0.29
DDX49-213ENST00000602113 PEMTQ9UBM1 199 aa13.23□□□□□ -0.29
DDX49-213ENST00000602113 TMEM218A2RU14 115 aa13.22□□□□□ -0.29
DDX49-213ENST00000602113 PDE6HQ13956 83 aa13.22□□□□□ -0.29
DDX49-213ENST00000602113 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
DDX49-213ENST00000602113 SLC35B3Q9H1N7 401 aa13.22□□□□□ -0.29
DDX49-213ENST00000602113 MLXQ9UH92 298 aa13.22□□□□□ -0.29
DDX49-213ENST00000602113 SFTA3P0C7M3 94 aa13.21□□□□□ -0.29
DDX49-213ENST00000602113 TCF24Q7RTU0 167 aa13.21□□□□□ -0.29
DDX49-213ENST00000602113 EXOC3-AS1Q8N2X6 119 aa13.21□□□□□ -0.29
DDX49-213ENST00000602113 TXNDC17Q9BRA2 123 aa13.21□□□□□ -0.29
DDX49-213ENST00000602113 PGPA6NDG6 321 aa13.21□□□□□ -0.3
DDX49-213ENST00000602113 OVOL1O14753 267 aa13.21□□□□□ -0.3
DDX49-213ENST00000602113 BMI1P35226 326 aa13.21□□□□□ -0.3
DDX49-213ENST00000602113 FAM90A2PQ658T7 463 aa13.21□□□□□ -0.3
DDX49-213ENST00000602113 LINC00052Q96N35 136 aa13.21□□□□□ -0.3
DDX49-213ENST00000602113 OTORQ9NRC9 128 aa13.21□□□□□ -0.3
DDX49-213ENST00000602113 WNK1Q9H4A3 2382 aa13.2□□□□□ -0.3
DDX49-213ENST00000602113 SCO2A0A1W2PP80 73 aa13.2□□□□□ -0.3
DDX49-213ENST00000602113 HELTA6NFD8 242 aa13.2□□□□□ -0.3
DDX49-213ENST00000602113 PDE6DO43924 150 aa13.2□□□□□ -0.3
DDX49-213ENST00000602113 ADCYAP1P18509 176 aa13.2□□□□□ -0.3
DDX49-213ENST00000602113 IGFL4Q6B9Z1 124 aa13.2□□□□□ -0.3
DDX49-213ENST00000602113 NKX6-2Q9C056 277 aaPredicted RBP13.2□□□□□ -0.3
DDX49-213ENST00000602113 TMEM250H0YL14 139 aa13.19□□□□□ -0.3
DDX49-213ENST00000602113 ZNF253O75346 499 aa13.19□□□□□ -0.3
DDX49-213ENST00000602113 NDUFS6O75380 124 aaKnown RBP13.19□□□□□ -0.3
DDX49-213ENST00000602113 CEBPGP53567 150 aa13.19□□□□□ -0.3
DDX49-213ENST00000602113 LYPD1Q8N2G4 141 aa13.19□□□□□ -0.3
DDX49-213ENST00000602113 ZNF331Q9NQX6 463 aaPredicted RBP13.19□□□□□ -0.3
DDX49-213ENST00000602113 TRAV8-2A0A0B4J237 113 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 F6UZH7 168 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 M0QZ24 198 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 HLA-DMBP28068 263 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 RPL11P62913 178 aaKnown RBP13.18□□□□□ -0.3
DDX49-213ENST00000602113 GNG5P63218 68 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 PSG9Q00887 426 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 ZNF747Q9BV97 191 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 IGKV3-7A0A075B6H7 116 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 SLC25A5P05141 298 aaKnown RBP13.18□□□□□ -0.3
DDX49-213ENST00000602113 MEOX2P50222 304 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 LURAP1LQ8IV03 231 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 LINC00482Q8N8I6 264 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 TMEM158Q8WZ71 300 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 C11orf52Q96A22 123 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 NRN1Q9NPD7 142 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 EPDR1Q9UM22 224 aa13.18□□□□□ -0.3
DDX49-213ENST00000602113 SOCS3O14543 225 aa13.17□□□□□ -0.3
DDX49-213ENST00000602113 PF4P02776 101 aa13.17□□□□□ -0.3
DDX49-213ENST00000602113 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
DDX49-213ENST00000602113 C5orf17Q8NAS9 161 aa13.17□□□□□ -0.3
DDX49-213ENST00000602113 DERL1Q9BUN8 251 aa13.17□□□□□ -0.3
DDX49-213ENST00000602113 KRBOX1C9JBD0 128 aa13.16□□□□□ -0.3
DDX49-213ENST00000602113 M0R3E3 92 aa13.16□□□□□ -0.3
DDX49-213ENST00000602113 SOHLH1Q5JUK2 328 aa13.16□□□□□ -0.3
DDX49-213ENST00000602113 GBGT1Q8N5D6 347 aa13.16□□□□□ -0.3
DDX49-213ENST00000602113 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
DDX49-213ENST00000602113 RPUSD4Q96CM3 377 aaKnown RBP13.16□□□□□ -0.3
DDX49-213ENST00000602113 SLC50A1Q9BRV3 221 aa13.16□□□□□ -0.3
DDX49-213ENST00000602113 AAMDCQ9H7C9 122 aa13.16□□□□□ -0.3
DDX49-213ENST00000602113 F8W036 122 aa13.15□□□□□ -0.3
DDX49-213ENST00000602113 DEFB114Q30KQ6 69 aa13.15□□□□□ -0.3
DDX49-213ENST00000602113 C10orf91Q5T1B1 145 aa13.15□□□□□ -0.3
DDX49-213ENST00000602113 C2CD4CQ8TF44 421 aa13.15□□□□□ -0.3
DDX49-213ENST00000602113 TCEAL7Q9BRU2 100 aa13.15□□□□□ -0.3
DDX49-213ENST00000602113 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
DDX49-213ENST00000602113 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
DDX49-213ENST00000602113 PEX7O00628 323 aa13.15□□□□□ -0.31
DDX49-213ENST00000602113 DYNLRB2Q8TF09 96 aa13.15□□□□□ -0.31
DDX49-213ENST00000602113 DCANP1Q8TF63 244 aa13.15□□□□□ -0.31
DDX49-213ENST00000602113 C16orf92Q96LL3 132 aa13.15□□□□□ -0.31
DDX49-213ENST00000602113 SEC11CQ9BY50 192 aa13.15□□□□□ -0.31
DDX49-213ENST00000602113 PARLQ9H300 379 aa13.15□□□□□ -0.31
DDX49-213ENST00000602113 RPH3ALQ9UNE2 315 aa13.15□□□□□ -0.31
DDX49-213ENST00000602113 TCRAP04437 139 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 ZNF674Q2M3X9 581 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 C3orf56Q8N813 242 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 SPATA3Q8NHX4 192 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 CMTM2Q8TAZ6 248 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 HIST1H2BAQ96A08 127 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 LINC00479Q96M42 142 aa13.14□□□□□ -0.31
DDX49-213ENST00000602113 ZNF705FA8MVS1 300 aaPredicted RBP13.13□□□□□ -0.31
DDX49-213ENST00000602113 TFPI2P48307 235 aa13.13□□□□□ -0.31
DDX49-213ENST00000602113 CD300EQ496F6 205 aaPredicted RBP13.13□□□□□ -0.31
DDX49-213ENST00000602113 C12orf54Q6X4T0 127 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms