RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 SRRQ9GZT4 340 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 NPVFQ9HCQ7 196 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 SSSCA1O60232 199 aa12.57□□□□□ -0.4
CHMP2A-208ENST00000601220 RRAS2P62070 204 aaPredicted RBP12.57□□□□□ -0.4
CHMP2A-208ENST00000601220 BAK1Q16611 211 aa12.57□□□□□ -0.4
CHMP2A-208ENST00000601220 TMEM256Q8N2U0 113 aa12.57□□□□□ -0.4
CHMP2A-208ENST00000601220 ATG101Q9BSB4 218 aa12.57□□□□□ -0.4
CHMP2A-208ENST00000601220 ARV1Q9H2C2 271 aa12.57□□□□□ -0.4
CHMP2A-208ENST00000601220 LINC00588Q9Y4M8 146 aa12.57□□□□□ -0.4
CHMP2A-208ENST00000601220 ATP5G1P05496 136 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 OR4E1P0C645 316 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 METTL15P1P0C7V9 234 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 S100A5P33763 92 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 ATP5G3P48201 142 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 RHOBP62745 196 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 ARL16Q0P5N6 197 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 KIR3DS1Q14943 382 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 RNASE8Q8TDE3 154 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 RPUSD4Q96CM3 377 aaKnown RBP12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 ARL6Q9H0F7 186 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 DNAH5Q8TE73 4624 aa12.56□□□□□ -0.4
CHMP2A-208ENST00000601220 NUDT3O95989 172 aa12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 SLC38A11Q08AI6 406 aa12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 TEPPQ6URK8 271 aa12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 RNF141Q8WVD5 230 aa12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 C16orf74Q96GX8 76 aa12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 RBM38Q9H0Z9 239 aaKnown RBP12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 ZNF331Q9NQX6 463 aaPredicted RBP12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 TIMM8BQ9Y5J9 83 aaPredicted RBP12.55□□□□□ -0.4
CHMP2A-208ENST00000601220 NAP1L6A6NFF2 107 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 CXCL2P19875 107 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 BTCP35070 178 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 CDKN1BP46527 198 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 TAS2R30P59541 319 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 C6orf223Q8N319 242 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 ZBTB8BQ8NAP8 495 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 SDHCQ99643 169 aaPredicted RBP12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 RCL1Q9Y2P8 373 aaKnown RBP12.54□□□□□ -0.4
CHMP2A-208ENST00000601220 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 TSC22D2O75157 780 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 SNRPCP09234 159 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 HTN1P15515 57 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 ANXA7P20073 488 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 C4orf46Q504U0 113 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 PXDC1Q5TGL8 231 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 LRRC20Q8TCA0 184 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 TMEM37Q8WXS4 190 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 PPP1R14DQ9NXH3 145 aa12.53□□□□□ -0.4
CHMP2A-208ENST00000601220 APOBP04114 4563 aaKnown RBP12.52□□□□□ -0.4
CHMP2A-208ENST00000601220 H7BYZ3 331 aa12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 AGPAT2O15120 278 aa12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 CCL18P55774 89 aa12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 IAH1Q2TAA2 248 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 LINC00305Q7Z4B0 112 aa12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 S100A7AQ86SG5 101 aa12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 GGACTQ9BVM4 153 aa12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 PARD6GQ9BYG4 376 aaPredicted RBP12.52□□□□□ -0.41
CHMP2A-208ENST00000601220 C7orf66A4D0T2 115 aa12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 SLC17A3O00476 420 aa12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 SSX7Q7RTT5 188 aa12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 SAT2Q96F10 170 aaPredicted RBP12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 MGST2Q99735 147 aa12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 C20orf144Q9BQM9 153 aa12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 MGAT4CQ9UBM8 478 aa12.51□□□□□ -0.41
CHMP2A-208ENST00000601220 C16orf90A8MZG2 172 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 H3BQ15 152 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 GOSR2O14653 212 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 CDK2AP2O75956 126 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 MBPP02686 304 aaPredicted RBP12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 IGLC2P0DOY2 106 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 ZNF546Q86UE3 836 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 MITD1Q8WV92 249 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 SLC50A1Q9BRV3 221 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 KRTAP1-5Q9BYS1 174 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 RNF24Q9Y225 148 aa12.5□□□□□ -0.41
CHMP2A-208ENST00000601220 H3BTX0 84 aa12.49□□□□□ -0.41
CHMP2A-208ENST00000601220 SCGB1D2O95969 90 aa12.49□□□□□ -0.41
CHMP2A-208ENST00000601220 HOXA5P20719 270 aa12.49□□□□□ -0.41
CHMP2A-208ENST00000601220 OPCMLQ14982 345 aa12.49□□□□□ -0.41
CHMP2A-208ENST00000601220 BPIFA4PQ86YQ2 179 aa12.49□□□□□ -0.41
CHMP2A-208ENST00000601220 Q9H8V8 135 aa12.49□□□□□ -0.41
CHMP2A-208ENST00000601220 GSKIPQ9P0R6 139 aa12.49□□□□□ -0.41
CHMP2A-208ENST00000601220 LINC00854A0A1B0GVQ3 168 aa12.48□□□□□ -0.41
CHMP2A-208ENST00000601220 CCDC160A6NGH7 325 aa12.48□□□□□ -0.41
CHMP2A-208ENST00000601220 CT45A10P0DMU9 189 aa12.48□□□□□ -0.41
CHMP2A-208ENST00000601220 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
CHMP2A-208ENST00000601220 ZNF503Q96F45 646 aa12.48□□□□□ -0.41
CHMP2A-208ENST00000601220 C11orf1Q9H5F2 150 aa12.48□□□□□ -0.41
CHMP2A-208ENST00000601220 TRAV26-1A0A087WT03 109 aa12.47□□□□□ -0.41
CHMP2A-208ENST00000601220 ZNF701M0R085 212 aaPredicted RBP12.47□□□□□ -0.41
CHMP2A-208ENST00000601220 OR5I1Q13606 314 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms