RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 LYRM1O43325 122 aa10.65□□□□□ -0.7
SHKBP1-226ENST00000600791 DAD1P61803 113 aa10.65□□□□□ -0.7
SHKBP1-226ENST00000600791 PXDC1Q5TGL8 231 aa10.65□□□□□ -0.7
SHKBP1-226ENST00000600791 OR8A1Q8NGG7 326 aa10.65□□□□□ -0.7
SHKBP1-226ENST00000600791 GGACTQ9BVM4 153 aa10.65□□□□□ -0.7
SHKBP1-226ENST00000600791 M0R2N4 97 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 GOSR2O14653 212 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 PSG3Q16557 428 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 TMEM88Q6PEY1 159 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 UBE2DNLQ8IWF7 75 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 LRRC20Q8TCA0 184 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 MGST2Q99735 147 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 RNF24Q9Y225 148 aa10.64□□□□□ -0.71
SHKBP1-226ENST00000600791 TRAV6A0A075B6T7 132 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 PLAC8L1A1L4L8 177 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 LYRM9A8MSI8 78 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 L7N2F9 121 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 TCRBP04435 133 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 CXCL2P19875 107 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 TSPOP30536 169 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 B2MP61769 119 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 RHOBP62745 196 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 VAMP2P63027 116 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 ZNF846Q147U1 533 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 LCN15Q6UWW0 184 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 RPUSD4Q96CM3 377 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 SEC22CQ9BRL7 303 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 NUDT15Q9NV35 164 aa10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 LSM5Q9Y4Y9 91 aaKnown RBP10.63□□□□□ -0.71
SHKBP1-226ENST00000600791 FAM25EA8MYX2 175 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 RTL8CO15255 209 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 COX7A2P2O60397 106 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 SNRPCP09234 159 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 AZU1P20160 251 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 LGALS9BQ3B8N2 356 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 MORN5Q5VZ52 161 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 ZNF431Q8TF32 576 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 TMEM37Q8WXS4 190 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 ZNF331Q9NQX6 463 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 PPP1R14DQ9NXH3 145 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 NACAE9PAV3 2078 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 DNAH11Q96DT5 4516 aa10.62□□□□□ -0.71
SHKBP1-226ENST00000600791 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 A0A1B0GVY2 172 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 SLC17A3O00476 420 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 BCAP31P51572 246 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 CAV2P51636 162 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 OPCMLQ14982 345 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 BPIFA4PQ86YQ2 179 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 TMEM256Q8N2U0 113 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 LINC01587Q99440 93 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 SLC50A1Q9BRV3 221 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 C11orf1Q9H5F2 150 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 PKD1P98161 4303 aa10.61□□□□□ -0.71
SHKBP1-226ENST00000600791 C5orf51A6NDU8 294 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 H3BTX0 84 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 CST7O76096 145 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 DEFB130BP0DP73 79 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 DEFB130AP0DP74 79 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 CDKN1BP46527 198 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 CAMLGP49069 296 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 TAS2R60P59551 318 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 RNF212Q495C1 297 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 C10orf113Q5VZT2 155 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 NRARPQ7Z6K4 114 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 NDUFA13Q9P0J0 144 aa10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 DYNC1H1Q14204 4646 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-226ENST00000600791 FAM24AA6NFZ4 105 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 IGLC2P0DOY2 106 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 FCN2Q15485 313 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 Q6ZR54 194 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 C12orf45Q8N5I9 185 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 C2orf50Q96LR7 162 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 CCDC32Q9BV29 185 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 BATF3Q9NR55 127 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 UQCC1Q9NVA1 299 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 WDR83OSQ9Y284 106 aa10.59□□□□□ -0.71
SHKBP1-226ENST00000600791 PRAC2D3DTV9 90 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 H3BQ15 152 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 HTN1P15515 57 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 S100A10P60903 97 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 RAB31Q13636 194 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 VWC2Q2TAL6 325 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 MIC13Q5XKP0 118 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 Q6ZRG5 221 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 C16orf74Q96GX8 76 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 PARD6GQ9BYG4 376 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 KRTAP17-1Q9BYP8 105 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 DNAJC4Q9NNZ3 241 aa10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 LYRM2Q9NU23 88 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-226ENST00000600791 TRAV5A0A0B4J249 113 aa10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 UBE2L5PA0A1B0GUS4 154 aa10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 IGSF23A1L1A6 192 aa10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 H2AFB2P0C5Z0 115 aa10.57□□□□□ -0.72
SHKBP1-226ENST00000600791 PVALBP20472 110 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms