RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 KHDC3LQ587J8 217 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 GCSAMLQ5JQS6 135 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 Q6ZNX1 250 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 OR4B1Q8NGF8 309 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 WWC2-AS2Q96NR7 200 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 PSMG3Q9BT73 122 aaPredicted RBP9.59□□□□□ -0.87
SRRM1-223ENST00000600523 AAMDCQ9H7C9 122 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 PPP1R14DQ9NXH3 145 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 HLA-DRB4X5D2U9 266 aa9.59□□□□□ -0.87
SRRM1-223ENST00000600523 TRAV5A0A0B4J249 113 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 A0A0D9SG52 128 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 H3BMM0 161 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 OR7C2O60412 319 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 ZNF253O75346 499 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
SRRM1-223ENST00000600523 PDE6HQ13956 83 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 ZNF345Q14585 488 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 PSG3Q16557 428 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 MORN5Q5VZ52 161 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 OR51M1Q9H341 326 aa9.58□□□□□ -0.88
SRRM1-223ENST00000600523 KANTRA0A1W2PQU2 76 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 SMLR1H3BR10 107 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 MRPS12O15235 138 aaKnown RBP9.57□□□□□ -0.88
SRRM1-223ENST00000600523 PFDN1O60925 122 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 ATP6V0CP27449 155 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 EIF5AP63241 154 aaKnown RBP9.57□□□□□ -0.88
SRRM1-223ENST00000600523 MIR17HGQ75NE6 70 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 RNF182Q8N6D2 247 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 OR10G4Q8NGN3 311 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 OR10G9Q8NGN4 311 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 OR10G7Q8NGN6 311 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 OR2G3Q8NGZ4 309 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 RNF183Q96D59 192 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 CLUHP3Q96NS8 147 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 ARPC5LQ9BPX5 153 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 PAXXQ9BUH6 204 aa9.57□□□□□ -0.88
SRRM1-223ENST00000600523 ZNF331Q9NQX6 463 aaPredicted RBP9.57□□□□□ -0.88
SRRM1-223ENST00000600523 A0A0J9YX75 114 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 IGKV3-20P01619 116 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 IGFL4Q6B9Z1 124 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 RPL7L1Q6DKI1 246 aaKnown RBP9.56□□□□□ -0.88
SRRM1-223ENST00000600523 AKAP14Q86UN6 197 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 OR10J6PQ8NGY7 276 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 BLNKQ8WV28 456 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 RNF141Q8WVD5 230 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 RPUSD4Q96CM3 377 aaKnown RBP9.56□□□□□ -0.88
SRRM1-223ENST00000600523 SLC25A2Q9BXI2 301 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 RETNQ9HD89 108 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 PRELID1Q9Y255 219 aa9.56□□□□□ -0.88
SRRM1-223ENST00000600523 TGP01266 2768 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 hCG_2014768A0A024R1R8 64 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 TRBV19A0A075B6N1 114 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 TRAV8-2A0A0B4J237 113 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 G3V3Q6 166 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 H3BQ15 152 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 H3BTX0 84 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 SNRPCP09234 159 aaKnown RBP9.55□□□□□ -0.88
SRRM1-223ENST00000600523 NBEAP1P0C6P0 100 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 PYYP10082 97 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 C4BPBP20851 252 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 UBE2L3P68036 154 aaKnown RBP9.55□□□□□ -0.88
SRRM1-223ENST00000600523 FAM122CQ6P4D5 195 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 PQLC2Q6ZP29 291 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 TCTE3Q8IZS6 198 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 KCNRGQ8N5I3 272 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 C20orf173Q96LM9 149 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 C17orf77Q96MU5 243 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 RARRES2Q99969 163 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 OVOL2Q9BRP0 275 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 ACTR3CQ9C0K3 210 aaPredicted RBP9.55□□□□□ -0.88
SRRM1-223ENST00000600523 ZNF586Q9NXT0 402 aa9.55□□□□□ -0.88
SRRM1-223ENST00000600523 F6UB75 175 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 AMBPP02760 352 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 CSN1S1P47710 185 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 CDC34P49427 236 aaPredicted RBP9.54□□□□□ -0.88
SRRM1-223ENST00000600523 CNN1P51911 297 aaKnown RBP9.54□□□□□ -0.88
SRRM1-223ENST00000600523 RAB2AP61019 212 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 HIST1H1AQ02539 215 aaPredicted RBP9.54□□□□□ -0.88
SRRM1-223ENST00000600523 FAM74A1Q5RGS3 127 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 AKR1C8PQ5T2L2 129 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 GDF5OSQ5U4N7 250 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 OR8A1Q8NGG7 326 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 OR11H2Q8NH07 326 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 IL17DQ8TAD2 202 aa9.54□□□□□ -0.88
SRRM1-223ENST00000600523 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
SRRM1-223ENST00000600523 SAT2Q96F10 170 aaPredicted RBP9.54□□□□□ -0.88
SRRM1-223ENST00000600523 OR10J4P0C629 311 aa9.53□□□□□ -0.88
SRRM1-223ENST00000600523 LYPD1Q8N2G4 141 aa9.53□□□□□ -0.88
SRRM1-223ENST00000600523 FAM167A-AS1Q96KT0 104 aa9.53□□□□□ -0.88
SRRM1-223ENST00000600523 ZNF471Q9BX82 626 aaPredicted RBP9.53□□□□□ -0.88
SRRM1-223ENST00000600523 XCL2Q9UBD3 114 aa9.53□□□□□ -0.88
SRRM1-223ENST00000600523 GOLT1BQ9Y3E0 138 aa9.53□□□□□ -0.88
SRRM1-223ENST00000600523 SLC17A3O00476 420 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 BCL2L11O43521 198 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 TSPOP30536 169 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 DEFB1P60022 68 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 FXYD5Q96DB9 178 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 ST6GAL2Q96JF0 529 aa9.52□□□□□ -0.89
SRRM1-223ENST00000600523 HYLS1Q96M11 299 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms