RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 OR11H4Q8NGC9 324 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 NEU1Q99519 415 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 NIPSNAP3BQ9BS92 247 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 ATG101Q9BSB4 218 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 UQCC1Q9NVA1 299 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 PUS1Q9Y606 427 aaKnown RBP eCLIP12.38□□□□□ -0.43
SSBP4-207ENST00000600244 YIF1AO95070 293 aa12.37□□□□□ -0.43
SSBP4-207ENST00000600244 APOHP02749 345 aaPredicted RBP12.37□□□□□ -0.43
SSBP4-207ENST00000600244 TEPPQ6URK8 271 aa12.37□□□□□ -0.43
SSBP4-207ENST00000600244 TMEM182Q6ZP80 229 aaPredicted RBP12.37□□□□□ -0.43
SSBP4-207ENST00000600244 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
SSBP4-207ENST00000600244 GRAMD2BQ96HH9 432 aa12.37□□□□□ -0.43
SSBP4-207ENST00000600244 FXYD6-FXYD2A0A087WZ82 144 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 SMCO3A2RU48 225 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 TMEM189A5PLL7 270 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 HMSDA8MTL9 139 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 K7EQG2 157 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 RD3LP0DJH9 198 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 HTN3P15516 51 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 EMP1P54849 157 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 ZNF705AQ6ZN79 300 aaPredicted RBP12.36□□□□□ -0.43
SSBP4-207ENST00000600244 Q8WTZ3 238 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 MGST2Q99735 147 aa12.36□□□□□ -0.43
SSBP4-207ENST00000600244 FABP1P07148 127 aa12.35□□□□□ -0.43
SSBP4-207ENST00000600244 CYP2G1PQ6ZSU1 146 aa12.35□□□□□ -0.43
SSBP4-207ENST00000600244 OR51G1Q8NGK1 321 aa12.35□□□□□ -0.43
SSBP4-207ENST00000600244 WFDC1Q9HC57 220 aa12.35□□□□□ -0.43
SSBP4-207ENST00000600244 SLC45A2Q9UMX9 530 aa12.35□□□□□ -0.43
SSBP4-207ENST00000600244 UBE2L5PA0A1B0GUS4 154 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 ZNF705FA8MVS1 300 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-207ENST00000600244 AGPAT2O15120 278 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 MPDU1O75352 247 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 CFDP00746 253 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-207ENST00000600244 ZNF705DP0CH99 300 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-207ENST00000600244 ZNF705BP0CI00 300 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-207ENST00000600244 PLP1P60201 277 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 SELENOTP62341 195 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 RPL11P62913 178 aaKnown RBP12.34□□□□□ -0.43
SSBP4-207ENST00000600244 CD300CQ08708 224 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 CLINT1Q14677 625 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 USF2Q15853 346 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-207ENST00000600244 FAM222AQ5U5X8 452 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 AKAP14Q86UN6 197 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 INO80EQ8NBZ0 244 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-207ENST00000600244 ATP5SQ99766 215 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 C1QTNF4Q9BXJ3 329 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 XCL2Q9UBD3 114 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 RABAC1Q9UI14 185 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 U3KQE9 123 aa12.34□□□□□ -0.43
SSBP4-207ENST00000600244 TEX48A0A1B0GUV7 120 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 ARPC5O15511 151 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 C1QBP02746 253 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 SMR3BP02814 79 aaPredicted RBP12.33□□□□□ -0.44
SSBP4-207ENST00000600244 ZNF688P0C7X2 276 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 LINC00869P0C866 280 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 GATA2P23769 480 aaPredicted RBP12.33□□□□□ -0.44
SSBP4-207ENST00000600244 CRYBB3P26998 211 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 NUP62P37198 522 aaPredicted RBP12.33□□□□□ -0.44
SSBP4-207ENST00000600244 OR2F1Q13607 317 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 RNF125Q96EQ8 232 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 C17orf77Q96MU5 243 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 GINS3Q9BRX5 216 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 PARD6GQ9BYG4 376 aaPredicted RBP12.33□□□□□ -0.44
SSBP4-207ENST00000600244 KRTAP1-5Q9BYS1 174 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 SMIM3Q9BZL3 60 aa12.33□□□□□ -0.44
SSBP4-207ENST00000600244 WDR61Q9GZS3 305 aaKnown RBP12.33□□□□□ -0.44
SSBP4-207ENST00000600244 IGHV3-66A0A0C4DH42 116 aa12.32□□□□□ -0.44
SSBP4-207ENST00000600244 SMIM9A6NGZ8 99 aa12.32□□□□□ -0.44
SSBP4-207ENST00000600244 KRTAP29-1A8MX34 341 aaPredicted RBP12.32□□□□□ -0.44
SSBP4-207ENST00000600244 IL4P05112 153 aa12.32□□□□□ -0.44
SSBP4-207ENST00000600244 FGF7P21781 194 aa12.32□□□□□ -0.44
SSBP4-207ENST00000600244 ZNF345Q14585 488 aa12.32□□□□□ -0.44
SSBP4-207ENST00000600244 OPCMLQ14982 345 aa12.32□□□□□ -0.44
SSBP4-207ENST00000600244 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
SSBP4-207ENST00000600244 RPL29P47914 159 aaKnown RBP12.31□□□□□ -0.44
SSBP4-207ENST00000600244 CAMLGP49069 296 aa12.31□□□□□ -0.44
SSBP4-207ENST00000600244 KCNRGQ8N5I3 272 aa12.31□□□□□ -0.44
SSBP4-207ENST00000600244 SYT8Q8NBV8 401 aa12.31□□□□□ -0.44
SSBP4-207ENST00000600244 BPIFCQ8NFQ6 507 aa12.31□□□□□ -0.44
SSBP4-207ENST00000600244 NPCDR1Q9BY65 106 aa12.31□□□□□ -0.44
SSBP4-207ENST00000600244 LINC00588Q9Y4M8 146 aa12.31□□□□□ -0.44
SSBP4-207ENST00000600244 CXCL2P19875 107 aa12.3□□□□□ -0.44
SSBP4-207ENST00000600244 NPPCP23582 126 aa12.3□□□□□ -0.44
SSBP4-207ENST00000600244 RAB31Q13636 194 aa12.3□□□□□ -0.44
SSBP4-207ENST00000600244 DCANP1Q8TF63 244 aa12.3□□□□□ -0.44
SSBP4-207ENST00000600244 METTL26Q96S19 204 aa12.3□□□□□ -0.44
SSBP4-207ENST00000600244 RFNGQ9Y644 331 aa12.3□□□□□ -0.44
SSBP4-207ENST00000600244 FAM229AH3BQW9 127 aa12.29□□□□□ -0.44
SSBP4-207ENST00000600244 HNRNPCP07910 306 aaKnown RBP eCLIP12.29□□□□□ -0.44
SSBP4-207ENST00000600244 NUTF2P61970 127 aaKnown RBP12.29□□□□□ -0.44
SSBP4-207ENST00000600244 PXDC1Q5TGL8 231 aa12.29□□□□□ -0.44
SSBP4-207ENST00000600244 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
SSBP4-207ENST00000600244 STXBP6Q8NFX7 210 aa12.29□□□□□ -0.44
SSBP4-207ENST00000600244 CYTL1Q9NRR1 136 aa12.29□□□□□ -0.44
SSBP4-207ENST00000600244 A0A0D9SG52 128 aa12.28□□□□□ -0.44
SSBP4-207ENST00000600244 BUB3O43684 328 aa12.28□□□□□ -0.44
SSBP4-207ENST00000600244 IFNA5P01569 189 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms