RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 RNF24Q9Y225 148 aa10.1□□□□□ -0.79
VRK3-219ENST00000600137 A0A0D9SG52 128 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 H3BMM0 161 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 JTBO76095 146 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 NDUFB4O95168 129 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 NHLRC4P0CG21 123 aaPredicted RBP10.09□□□□□ -0.79
VRK3-219ENST00000600137 PYYP10082 97 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 RPL35AP18077 110 aaKnown RBP10.09□□□□□ -0.79
VRK3-219ENST00000600137 ATF4P18848 351 aaPredicted RBP10.09□□□□□ -0.79
VRK3-219ENST00000600137 M6PRP20645 277 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 ID1P41134 155 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 SNRPD3P62318 126 aaKnown RBP10.09□□□□□ -0.79
VRK3-219ENST00000600137 SERF2P84101 59 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 RNF182Q8N6D2 247 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 C16orf92Q96LL3 132 aa10.09□□□□□ -0.79
VRK3-219ENST00000600137 MRPL32Q9BYC8 188 aaKnown RBP10.09□□□□□ -0.79
VRK3-219ENST00000600137 TRBV19A0A075B6N1 114 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 KIR2DL5BA0A0G2JN68 375 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 KIR2DL5BA0A0G2JPC4 375 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 A8MTW9 85 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 F6UB75 175 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 HIST1H1EP10412 219 aaKnown RBP10.08□□□□□ -0.8
VRK3-219ENST00000600137 ACOT6Q3I5F7 207 aaPredicted RBP10.08□□□□□ -0.8
VRK3-219ENST00000600137 SAMD13Q5VXD3 122 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 AKAP14Q86UN6 197 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 KIR2DL5AQ8N109 375 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 KIR2DL5BQ8NHK3 375 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 FXYD5Q96DB9 178 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 LINC00052Q96N35 136 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 ARPC5LQ9BPX5 153 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 SAV1Q9H4B6 383 aaPredicted RBP10.08□□□□□ -0.8
VRK3-219ENST00000600137 RPRMQ9NS64 109 aa10.08□□□□□ -0.8
VRK3-219ENST00000600137 BORCS7-ASMTA0A0B4J1R7 106 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 A0A0J9YX75 114 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 SPP1P10451 314 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 HLA-DRB4P13762 266 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 RHOBP62745 196 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 PSG3Q16557 428 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 ACTL10Q5JWF8 245 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 LCN15Q6UWW0 184 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 TMUB2Q71RG4 321 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 OR10G4Q8NGN3 311 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 OR10G9Q8NGN4 311 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 OR10G7Q8NGN6 311 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 GNPNAT1Q96EK6 184 aaPredicted RBP10.07□□□□□ -0.8
VRK3-219ENST00000600137 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 HLA-DRB4X5D2U9 266 aa10.07□□□□□ -0.8
VRK3-219ENST00000600137 BCL2L11O43521 198 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 ZNF253O75346 499 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 GUK1Q16774 197 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 SSX7Q7RTT5 188 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 RNF141Q8WVD5 230 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 CLUHP3Q96NS8 147 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 OVOL2Q9BRP0 275 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 CSTL1Q9H114 145 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 RETNQ9HD89 108 aa10.06□□□□□ -0.8
VRK3-219ENST00000600137 DNAH7Q8WXX0 4024 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 ZNF705FA8MVS1 300 aaPredicted RBP10.05□□□□□ -0.8
VRK3-219ENST00000600137 PRAC2D3DTV9 90 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 PRB4P10163 310 aaPredicted RBP10.05□□□□□ -0.8
VRK3-219ENST00000600137 FAM122CQ6P4D5 195 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 AMTNQ6UX39 209 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 STHQ8IWL8 128 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 HYLS1Q96M11 299 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 SLC50A1Q9BRV3 221 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 PAXXQ9BUH6 204 aa10.05□□□□□ -0.8
VRK3-219ENST00000600137 UBE2CO00762 179 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 OR10J4P0C629 311 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 ZNF705DP0CH99 300 aaPredicted RBP10.04□□□□□ -0.8
VRK3-219ENST00000600137 ZNF705BP0CI00 300 aaPredicted RBP10.04□□□□□ -0.8
VRK3-219ENST00000600137 STAG3L2P0CL84 134 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 C4BPBP20851 252 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 APOC4P55056 127 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 PDE6HQ13956 83 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 TMEM41BQ5BJD5 291 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 Q6ZWC4 215 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 CSNK1G2-AS1Q8NCQ2 148 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 SUN5Q8TC36 379 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 RAB24Q969Q5 203 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 SPATA25Q9BR10 227 aa10.04□□□□□ -0.8
VRK3-219ENST00000600137 M0R3E3 92 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 HMGB3O15347 200 aaKnown RBP10.03□□□□□ -0.8
VRK3-219ENST00000600137 MBP02144 154 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 C9orf62Q8N4C0 152 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 LRRC20Q8TCA0 184 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 BLNKQ8WV28 456 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 RPUSD4Q96CM3 377 aaKnown RBP10.03□□□□□ -0.8
VRK3-219ENST00000600137 RNF183Q96D59 192 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 PHYHIPLQ96FC7 376 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 RCHY1Q96PM5 261 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 ZNF471Q9BX82 626 aaPredicted RBP10.03□□□□□ -0.8
VRK3-219ENST00000600137 U3KQK5 164 aa10.03□□□□□ -0.8
VRK3-219ENST00000600137 A0A1W2PPV4 95 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 KANTRA0A1W2PQU2 76 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 OR7C2O60412 319 aa10.02□□□□□ -0.81
VRK3-219ENST00000600137 SEC11BP0C7V7 166 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms