RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 ATF4P18848 351 aaPredicted RBP14.01□□□□□ -0.17
CCDC9-205ENST00000600117 SLC51BQ86UW2 128 aa14.01□□□□□ -0.17
CCDC9-205ENST00000600117 ZNF503Q96F45 646 aa14.01□□□□□ -0.17
CCDC9-205ENST00000600117 WFDC10AQ9H1F0 79 aa14.01□□□□□ -0.17
CCDC9-205ENST00000600117 MAP6D1Q9H9H5 199 aa14.01□□□□□ -0.17
CCDC9-205ENST00000600117 UBQLN2Q9UHD9 624 aa14.01□□□□□ -0.17
CCDC9-205ENST00000600117 H3BQ15 152 aa14□□□□□ -0.17
CCDC9-205ENST00000600117 BOLA2-SMG1P6H3BVE0 249 aa14□□□□□ -0.17
CCDC9-205ENST00000600117 PYYP10082 97 aa14□□□□□ -0.17
CCDC9-205ENST00000600117 MEOX2P50222 304 aa14□□□□□ -0.17
CCDC9-205ENST00000600117 FAM110AQ9BQ89 295 aa14□□□□□ -0.17
CCDC9-205ENST00000600117 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
CCDC9-205ENST00000600117 CSMD3Q7Z407 3707 aa14□□□□□ -0.17
CCDC9-205ENST00000600117 SNRPCP09234 159 aaKnown RBP13.99□□□□□ -0.17
CCDC9-205ENST00000600117 ZNF688P0C7X2 276 aa13.99□□□□□ -0.17
CCDC9-205ENST00000600117 C4BPBP20851 252 aa13.99□□□□□ -0.17
CCDC9-205ENST00000600117 CDC34P49427 236 aaPredicted RBP13.99□□□□□ -0.17
CCDC9-205ENST00000600117 AKR1C8PQ5T2L2 129 aa13.99□□□□□ -0.17
CCDC9-205ENST00000600117 HRH4Q9H3N8 390 aa13.99□□□□□ -0.17
CCDC9-205ENST00000600117 ZNF586Q9NXT0 402 aa13.99□□□□□ -0.17
CCDC9-205ENST00000600117 TRAV8-2A0A0B4J237 113 aa13.98□□□□□ -0.17
CCDC9-205ENST00000600117 A0A1W2PPV4 95 aa13.98□□□□□ -0.17
CCDC9-205ENST00000600117 HIST1H1EP10412 219 aaKnown RBP13.98□□□□□ -0.17
CCDC9-205ENST00000600117 ZNF726P1Q15940 193 aa13.98□□□□□ -0.17
CCDC9-205ENST00000600117 SSX7Q7RTT5 188 aa13.98□□□□□ -0.17
CCDC9-205ENST00000600117 TMED6Q8WW62 240 aa13.98□□□□□ -0.17
CCDC9-205ENST00000600117 RAB24Q969Q5 203 aa13.98□□□□□ -0.17
CCDC9-205ENST00000600117 OR51M1Q9H341 326 aa13.98□□□□□ -0.17
CCDC9-205ENST00000600117 OR11H12B2RN74 326 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 H3BTX0 84 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 ISLRO14498 428 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 STAG3L2P0CL84 134 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 STAG3L3P0CL85 134 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 PSMB3P49720 205 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 CMC4P56277 68 aaPredicted RBP13.97□□□□□ -0.17
CCDC9-205ENST00000600117 TAS2R45P59539 299 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 DEFB131AP59861 70 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 KHDC3LQ587J8 217 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 CASC10Q5T4H9 136 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 SAMD13Q5VXD3 122 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 DEFB125Q8N687 156 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 FXYD5Q96DB9 178 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 SAT2Q96F10 170 aaPredicted RBP13.97□□□□□ -0.17
CCDC9-205ENST00000600117 CITED4Q96RK1 184 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 PAXXQ9BUH6 204 aa13.97□□□□□ -0.17
CCDC9-205ENST00000600117 ACTR3CQ9C0K3 210 aaPredicted RBP13.97□□□□□ -0.17
CCDC9-205ENST00000600117 SLC17A3O00476 420 aa13.96□□□□□ -0.17
CCDC9-205ENST00000600117 HMGB3O15347 200 aaKnown RBP13.96□□□□□ -0.17
CCDC9-205ENST00000600117 OR7C2O60412 319 aa13.96□□□□□ -0.17
CCDC9-205ENST00000600117 ZNF124Q15973 351 aa13.96□□□□□ -0.17
CCDC9-205ENST00000600117 LCN15Q6UWW0 184 aa13.96□□□□□ -0.17
CCDC9-205ENST00000600117 C16orf92Q96LL3 132 aa13.96□□□□□ -0.17
CCDC9-205ENST00000600117 C20orf173Q96LM9 149 aa13.96□□□□□ -0.17
CCDC9-205ENST00000600117 ZNF331Q9NQX6 463 aaPredicted RBP13.96□□□□□ -0.17
CCDC9-205ENST00000600117 TRBV19A0A075B6N1 114 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 CTXND1A0A1B0GTU2 59 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 UMAD1C9J7I0 102 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 NDUFB4O95168 129 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 OR10J4P0C629 311 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 IGHV4-30-4P0DP06 118 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 ID1P41134 155 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 SNRPD3P62318 126 aaKnown RBP13.95□□□□□ -0.18
CCDC9-205ENST00000600117 GUK1Q16774 197 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 PSMG4Q5JS54 123 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 IGFL4Q6B9Z1 124 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 PQLC2Q6ZP29 291 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 APRG1Q8IVJ8 170 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 MUC7Q8TAX7 377 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 RNF141Q8WVD5 230 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 STARD9Q9P2P6 4700 aa13.95□□□□□ -0.18
CCDC9-205ENST00000600117 A8MZ25 164 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 ZNF253O75346 499 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 NBEAP1P0C6P0 100 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 ARL14EPLP0DKL9 152 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 HLA-DMBP28068 263 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 FHITP49789 147 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 SLC50A1Q9BRV3 221 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 SRD5A3Q9H8P0 318 aa13.94□□□□□ -0.18
CCDC9-205ENST00000600117 UBE2L3P68036 154 aaKnown RBP13.93□□□□□ -0.18
CCDC9-205ENST00000600117 PDE6HQ13956 83 aa13.93□□□□□ -0.18
CCDC9-205ENST00000600117 EIF5AL1Q6IS14 154 aaKnown RBP13.93□□□□□ -0.18
CCDC9-205ENST00000600117 RNF182Q8N6D2 247 aa13.93□□□□□ -0.18
CCDC9-205ENST00000600117 LINC00052Q96N35 136 aa13.93□□□□□ -0.18
CCDC9-205ENST00000600117 LCE6AA0A183 80 aa13.92□□□□□ -0.18
CCDC9-205ENST00000600117 DEFB1P60022 68 aa13.92□□□□□ -0.18
CCDC9-205ENST00000600117 DPPA3Q6W0C5 159 aa13.92□□□□□ -0.18
CCDC9-205ENST00000600117 SUN5Q8TC36 379 aa13.92□□□□□ -0.18
CCDC9-205ENST00000600117 LRRC20Q8TCA0 184 aa13.92□□□□□ -0.18
CCDC9-205ENST00000600117 BLNKQ8WV28 456 aa13.92□□□□□ -0.18
CCDC9-205ENST00000600117 PHYHIPLQ96FC7 376 aa13.92□□□□□ -0.18
CCDC9-205ENST00000600117 CXorf1O96002 111 aa13.91□□□□□ -0.18
CCDC9-205ENST00000600117 GCHFRP30047 84 aa13.91□□□□□ -0.18
CCDC9-205ENST00000600117 SULT1A2P50226 295 aa13.91□□□□□ -0.18
CCDC9-205ENST00000600117 PSG3Q16557 428 aa13.91□□□□□ -0.18
CCDC9-205ENST00000600117 LINC00322Q6ZN03 302 aaPredicted RBP13.91□□□□□ -0.18
CCDC9-205ENST00000600117 FAM213BQ8TBF2 198 aa13.91□□□□□ -0.18
CCDC9-205ENST00000600117 HYDINQ4G0P3 5121 aa13.91□□□□□ -0.18
CCDC9-205ENST00000600117 RBMY1BA6NDE4 496 aaKnown RBP13.9□□□□□ -0.18
CCDC9-205ENST00000600117 RBMY1EA6NEQ0 496 aaKnown RBP13.9□□□□□ -0.18
CCDC9-205ENST00000600117 KNCNA6PVL3 124 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms