RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 DNAJC4Q9NNZ3 241 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 MFAP4P55083 255 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 LINC00310P59036 64 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 OR5AU1Q8NGC0 362 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 OR1L4Q8NGR5 311 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 IGF2BP2-AS1Q96M15 143 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 C21orf62Q9NYP8 219 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 CUBNO60494 3623 aa11.81□□□□□ -0.52
VRK3-218ENST00000600031 PSMB11A5LHX3 300 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 IGKV1-17P01599 117 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 C15orf32Q32M92 178 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 OR10J3Q5JRS4 329 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 Q6ZWC4 215 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 TMEM160Q9NX00 188 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 IGLV2-8P01709 118 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 IBA57Q5T440 356 aaKnown RBP11.8□□□□□ -0.52
VRK3-218ENST00000600031 FAM167A-AS1Q96KT0 104 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 RNASE7Q9H1E1 156 aaKnown RBP11.8□□□□□ -0.52
VRK3-218ENST00000600031 NAT8BQ9UHF3 227 aa11.8□□□□□ -0.52
VRK3-218ENST00000600031 SMIM27A0A1W2PRY6 76 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 M0R143 59 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 TEX43Q6ZNM6 134 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 TMEM136Q6ZRR5 245 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 MRPL52Q86TS9 123 aaKnown RBP11.79□□□□□ -0.52
VRK3-218ENST00000600031 VN1R17PQ8TDU5 208 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 SLC25A2Q9BXI2 301 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 CDC42EP3Q9UKI2 254 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 MTORP42345 2549 aa11.79□□□□□ -0.52
VRK3-218ENST00000600031 GNG7O60262 68 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 HLA-DQA1P01909 254 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 PSG1P11464 419 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 NUTF2P61970 127 aaKnown RBP11.78□□□□□ -0.52
VRK3-218ENST00000600031 UBE2L3P68036 154 aaKnown RBP11.78□□□□□ -0.52
VRK3-218ENST00000600031 Q56UQ5 140 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 TMEM86BQ8N661 226 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 C20orf144Q9BQM9 153 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 SAMD10Q9BYL1 202 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 PRSS22Q9GZN4 317 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 NPFFR1Q9GZQ6 430 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 ZNF702PQ9H963 129 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 DNAJC9-AS1A6NH13 148 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 CFHR3Q02985 330 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 PATE2Q6UY27 113 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 ESM1Q9NQ30 184 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 HIVEP2P31629 2446 aa11.78□□□□□ -0.52
VRK3-218ENST00000600031 IZUMO1RA6ND01 250 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 OR2T8A6NH00 312 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 EREGO14944 169 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 TRGV3P03979 118 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.52
VRK3-218ENST00000600031 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 ZNF502Q8TBZ5 544 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 GNB4Q9HAV0 340 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 ZNF580Q9UK33 172 aa11.77□□□□□ -0.52
VRK3-218ENST00000600031 BAHCC1Q9P281 2608 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 FRMD6-AS1P0C7T7 363 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 TMEM183BQ1AE95 376 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 RASL11AQ6T310 242 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 FAM231DQ6ZW35 169 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 Q71RC1 249 aaPredicted RBP11.77□□□□□ -0.53
VRK3-218ENST00000600031 PAXXQ9BUH6 204 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 SNHG12Q9BXW3 62 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 KLK15Q9H2R5 256 aa11.77□□□□□ -0.53
VRK3-218ENST00000600031 TRAV30A0A087WSZ9 112 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 TRAV5A0A0B4J249 113 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 BRI3O95415 125 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 IGLV1-40P01703 118 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 GPX1P07203 203 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 ORM2P19652 201 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 FCGR2BP31994 310 aaPredicted RBP11.76□□□□□ -0.53
VRK3-218ENST00000600031 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 ZNF329Q86UD4 541 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 CCDC140Q96MF4 163 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 TXN2Q99757 166 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 CHRDL1Q9BU40 450 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 SERTAD4Q9NUC0 356 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 HIVEP1P15822 2718 aa11.76□□□□□ -0.53
VRK3-218ENST00000600031 FAM223BA6NKX1 122 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 H3BUA1 57 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 CTSGP08311 255 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 SRD5A1P18405 259 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 RAB4AP20338 218 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 ATP5G2Q06055 141 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 FAM223AQ8IWN6 122 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 OR1B1Q8NGR6 318 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 EEF1AKMT3Q96AZ1 226 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 ZNF586Q9NXT0 402 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 F2Z2F3 143 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 TCAPO15273 167 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 SPINK4O60575 86 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 CLEC3BP05452 202 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 PF4V1P10720 104 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 GPR183P32249 361 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 PLP1P60201 277 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
VRK3-218ENST00000600031 WIPF2Q8TF74 440 aaPredicted RBP11.75□□□□□ -0.53
VRK3-218ENST00000600031 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms