RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 PRM2P04554 102 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 IGLC2P0DOY2 106 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 CAMLGP49069 296 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 H2BFSP57053 126 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 FGL1Q08830 312 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 C2CD4CQ8TF44 421 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 UQCC1Q9NVA1 299 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 OR5AC2Q9NZP5 309 aa8.68□□□□□ -1.02
LIG1-217ENST00000599165 IGHV3OR16-12A0A075B7B8 117 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 TRAV5A0A0B4J249 113 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 UBE2L5PA0A1B0GUS4 154 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 SMIM9A6NGZ8 99 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 C11orf94C9JXX5 98 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 INMT-MINDY4F8WBC2 141 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 H3BQ15 152 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 H3BTX0 84 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 NHLH2Q02577 135 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 PSG3Q16557 428 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 SPINK13Q1W4C9 94 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 ZNF738Q8NE65 137 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 CHAC2Q8WUX2 184 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 SAT2Q96F10 170 aaPredicted RBP8.67□□□□□ -1.02
LIG1-217ENST00000599165 IGF2BP2-AS1Q96M15 143 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 ZNF331Q9NQX6 463 aaPredicted RBP8.67□□□□□ -1.02
LIG1-217ENST00000599165 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 DNAH2Q9P225 4427 aa8.67□□□□□ -1.02
LIG1-217ENST00000599165 TRAV10A0A0B4J240 114 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 IGLL5B9A064 214 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 COX7A2P2O60397 106 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 PVALBP20472 110 aaPredicted RBP8.66□□□□□ -1.02
LIG1-217ENST00000599165 S100A7P31151 101 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 S100A11P31949 105 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 RPL29P47914 159 aaKnown RBP8.66□□□□□ -1.02
LIG1-217ENST00000599165 GCSAMLQ5JQS6 135 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 C10orf113Q5VZT2 155 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 BAP18Q8IXM2 172 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 RNF126Q9BV68 326 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 NMES1Q9C002 83 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 GPN1Q9HCN4 374 aaPredicted RBP8.66□□□□□ -1.02
LIG1-217ENST00000599165 SLC39A9Q9NUM3 307 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 DKK2Q9UBU2 259 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 RFNGQ9Y644 331 aa8.66□□□□□ -1.02
LIG1-217ENST00000599165 IGHV4-4A0A075B6R2 117 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 PLAC8L1A1L4L8 177 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 PRAF2O60831 178 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 CXCL2P19875 107 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 EMP1P54849 157 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 KIR3DS1Q14943 382 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 RPUSD4Q96CM3 377 aaKnown RBP8.65□□□□□ -1.02
LIG1-217ENST00000599165 DNAJC4Q9NNZ3 241 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 ZNF586Q9NXT0 402 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 PXMP4Q9Y6I8 212 aa8.65□□□□□ -1.02
LIG1-217ENST00000599165 FAT2Q9NYQ8 4349 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 TRAV12-2A0A075B6T6 113 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 DEFB131BA0A096LNP1 70 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 LOC102723971A0A1B0GUV8 181 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 BOLA2-SMG1P6H3BVE0 249 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 DUSP14O95147 198 aaKnown RBP8.64□□□□□ -1.03
LIG1-217ENST00000599165 AMBPP02760 352 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 FGF7P21781 194 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 TCTAP57738 103 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 B2MP61769 119 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 HIST1H1AQ02539 215 aaPredicted RBP8.64□□□□□ -1.03
LIG1-217ENST00000599165 BAXQ07812 192 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 FAM222AQ5U5X8 452 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 LCN15Q6UWW0 184 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 STX12Q86Y82 276 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 BPIFA4PQ86YQ2 179 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 OR5C1Q8NGR4 320 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 NPCDR1Q9BY65 106 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 PARD6GQ9BYG4 376 aaPredicted RBP8.64□□□□□ -1.03
LIG1-217ENST00000599165 GOLT1BQ9Y3E0 138 aa8.64□□□□□ -1.03
LIG1-217ENST00000599165 YTHDF2Q9Y5A9 579 aaKnown RBP8.64□□□□□ -1.03
LIG1-217ENST00000599165 TMEM189A5PLL7 270 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 ZNF705GA8MUZ8 300 aaPredicted RBP8.63□□□□□ -1.03
LIG1-217ENST00000599165 E5RGE8 158 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 NDUFB4O95168 129 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 HBE1P02100 147 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 SPART-AS1P0CW21 52 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 AZU1P20160 251 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 HBG1P69891 147 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 HBG2P69892 147 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 ATP6V1FQ16864 119 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 Q6ZRG5 221 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 THAP6Q8TBB0 222 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 PPP1R1CQ8WVI7 109 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 BATF3Q9NR55 127 aa8.63□□□□□ -1.03
LIG1-217ENST00000599165 DNAH17Q9UFH2 4485 aa8.62□□□□□ -1.03
LIG1-217ENST00000599165 INSP01308 110 aa8.62□□□□□ -1.03
LIG1-217ENST00000599165 RAB31Q13636 194 aa8.62□□□□□ -1.03
LIG1-217ENST00000599165 RRN3P1Q2M238 152 aa8.62□□□□□ -1.03
LIG1-217ENST00000599165 S100A7AQ86SG5 101 aa8.62□□□□□ -1.03
LIG1-217ENST00000599165 OR1L4Q8NGR5 311 aa8.62□□□□□ -1.03
LIG1-217ENST00000599165 FAM167A-AS1Q96KT0 104 aa8.62□□□□□ -1.03
LIG1-217ENST00000599165 RNF24Q9Y225 148 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms