RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 RAB2AP61019 212 aa11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 ZNF124Q15973 351 aa11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 KHDC3LQ587J8 217 aa11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 ZNF471Q9BX82 626 aaPredicted RBP11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 SH3BGRL3Q9H299 93 aa11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 OR51M1Q9H341 326 aa11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 CLEC5AQ9NY25 188 aa11.17□□□□□ -0.62
GTF2F1-206ENST00000598607 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 OR7C2O60412 319 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 ZNF253O75346 499 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 PDE6HQ13956 83 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 HAGHQ16775 308 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 ZFP69Q49AA0 526 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 FAM122CQ6P4D5 195 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 KIR2DL5BQ8NHK3 375 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 FAM167A-AS1Q96KT0 104 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 ASCL2Q99929 193 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 PAXXQ9BUH6 204 aa11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 ZNF331Q9NQX6 463 aaPredicted RBP11.16□□□□□ -0.62
GTF2F1-206ENST00000598607 TRAV8-2A0A0B4J237 113 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 H3BQ15 152 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 PYYP10082 97 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 RPL35AP18077 110 aaKnown RBP11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 C4BPBP20851 252 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 CDC34P49427 236 aaPredicted RBP11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 TMEM41BQ5BJD5 291 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 ACTL10Q5JWF8 245 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 PQLC2Q6ZP29 291 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 FOXI2Q6ZQN5 318 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 ZMAT4Q9H898 229 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 ZNF586Q9NXT0 402 aa11.15□□□□□ -0.62
GTF2F1-206ENST00000598607 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 KNCNA6PVL3 124 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 UBE2CO00762 179 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 SPP1P10451 314 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 PSG9Q00887 426 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 PSG3Q16557 428 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 LGALSLQ3ZCW2 172 aaPredicted RBP11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 AKR1C8PQ5T2L2 129 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 EBLN2Q6P2I7 272 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 MORN3Q6PF18 240 aaPredicted RBP11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 TRPT1Q86TN4 253 aaKnown RBP11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 RNF141Q8WVD5 230 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 SAT2Q96F10 170 aaPredicted RBP11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 SPATA25Q9BR10 227 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 SAV1Q9H4B6 383 aaPredicted RBP11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
GTF2F1-206ENST00000598607 PRKDCP78527 4128 aaKnown RBP11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 H3BTX0 84 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 SNRPCP09234 159 aaKnown RBP11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 NBEAP1P0C6P0 100 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 SEC11BP0C7V7 166 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 TPT1P13693 172 aaKnown RBP11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 BAP18Q8IXM2 172 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 RPP25LQ8N5L8 163 aaKnown RBP11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 BLNKQ8WV28 456 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 C20orf173Q96LM9 149 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 TM2D3Q9BRN9 247 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 CSTL1Q9H114 145 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 AAMDCQ9H7C9 122 aa11.13□□□□□ -0.63
GTF2F1-206ENST00000598607 H3BMM0 161 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 SLC17A3O00476 420 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 OR10J4P0C629 311 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 NUTF2P61970 127 aaKnown RBP11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 CD300CQ08708 224 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 STOML3Q8TAV4 291 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 RAB24Q969Q5 203 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 FXYD5Q96DB9 178 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 PRELID1Q9Y255 219 aa11.12□□□□□ -0.63
GTF2F1-206ENST00000598607 A0A0J9YX75 114 aa11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 DUSP14O95147 198 aaKnown RBP11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 STAG3L2P0CL84 134 aa11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 STAG3L3P0CL85 134 aa11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 Q6ZWC4 215 aa11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 MRPL53Q96EL3 112 aaKnown RBP11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 ZNF503Q96F45 646 aa11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 CLUHP3Q96NS8 147 aa11.11□□□□□ -0.63
GTF2F1-206ENST00000598607 CTXND1A0A1B0GTU2 59 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 UMAD1C9J7I0 102 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 NDUFB4O95168 129 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 HLA-DMBP28068 263 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 GDF5OSQ5U4N7 250 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 EIF5AL1Q6IS14 154 aaKnown RBP11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 LYPD1Q8N2G4 141 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 C9orf62Q8N4C0 152 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 OR4B1Q8NGF8 309 aa11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 RPUSD4Q96CM3 377 aaKnown RBP11.1□□□□□ -0.63
GTF2F1-206ENST00000598607 F6UB75 175 aa11.09□□□□□ -0.63
GTF2F1-206ENST00000598607 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms