RNA–Protein interactions for RNA: ENST00000598553.1

VRK3-214, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 595 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-214ENST00000598553 UHRF2Q96PU4 802 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 PSENENQ9NZ42 101 aa7.64□□□□□ -1.19
VRK3-214ENST00000598553 STRAPQ9Y3F4 350 aaKnown RBP7.64□□□□□ -1.19
VRK3-214ENST00000598553 IGHV3OR16-12A0A075B7B8 117 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 SMCO3A2RU48 225 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 ZNF705FA8MVS1 300 aaPredicted RBP7.63□□□□□ -1.19
VRK3-214ENST00000598553 C11orf94C9JXX5 98 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 NMBP08949 121 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 SNRPCP09234 159 aaKnown RBP7.63□□□□□ -1.19
VRK3-214ENST00000598553 ID1P41134 155 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 EIF5AP63241 154 aaKnown RBP7.63□□□□□ -1.19
VRK3-214ENST00000598553 SLC38A11Q08AI6 406 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 FAM78BQ5VT40 261 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 AMTNQ6UX39 209 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 TMEM14EPQ6UXP3 125 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 PATE2Q6UY27 113 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 FOXI2Q6ZQN5 318 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 CYP2G1PQ6ZSU1 146 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 OR8I2Q8N0Y5 310 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 OR4B1Q8NGF8 309 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 SUN5Q8TC36 379 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 ARPC5LQ9BPX5 153 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 RSG1Q9BU20 258 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 C11orf1Q9H5F2 150 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 SLC45A2Q9UMX9 530 aa7.63□□□□□ -1.19
VRK3-214ENST00000598553 IGHV4-4A0A075B6R2 117 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 A0A0J9YX75 114 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 ISLRO14498 428 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 MRPS12O15235 138 aaKnown RBP7.62□□□□□ -1.19
VRK3-214ENST00000598553 IFNA21P01568 189 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 MBPP02686 304 aaPredicted RBP7.62□□□□□ -1.19
VRK3-214ENST00000598553 EMP1P54849 157 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 TCTAP57738 103 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 IAH1Q2TAA2 248 aaPredicted RBP7.62□□□□□ -1.19
VRK3-214ENST00000598553 SAMD13Q5VXD3 122 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 MORN5Q5VZ52 161 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 ALKAL2Q6UX46 152 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 TMEM144Q7Z5S9 345 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 BPIFCQ8NFQ6 507 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 SMIM8Q96KF7 97 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 C2orf50Q96LR7 162 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 CLUHP3Q96NS8 147 aa7.62□□□□□ -1.19
VRK3-214ENST00000598553 SLC25A39Q9BZJ4 359 aaPredicted RBP7.62□□□□□ -1.19
VRK3-214ENST00000598553 RNF222A6NCQ9 220 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 A8MTW9 85 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 TAAR5O14804 337 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 CRXO43186 299 aaPredicted RBP7.61□□□□□ -1.19
VRK3-214ENST00000598553 LINC00869P0C866 280 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 TPT1P13693 172 aaKnown RBP7.61□□□□□ -1.19
VRK3-214ENST00000598553 GALR1P47211 349 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 MEOX2P50222 304 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 SPATA31B1PQ5VZV4 182 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 STOML3Q8TAV4 291 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 ZNF471Q9BX82 626 aaPredicted RBP7.61□□□□□ -1.19
VRK3-214ENST00000598553 MBD2Q9UBB5 411 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 HECTD4Q9Y4D8 3996 aa7.61□□□□□ -1.19
VRK3-214ENST00000598553 TRAV10A0A0B4J240 114 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 H3BTX0 84 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 M0R2Z0 102 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 RLN2P04090 185 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 DLK1P80370 383 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 SPINK13Q1W4C9 94 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 LRRC37A5PQ49AS3 106 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 EIF5AL1Q6IS14 154 aaKnown RBP7.6□□□□□ -1.19
VRK3-214ENST00000598553 C16orf92Q96LL3 132 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 GPR82Q96P67 336 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 NEU1Q99519 415 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 MGST2Q99735 147 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 SHANK2-AS3Q9BTD1 123 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 TMEM147Q9BVK8 224 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 RPRMQ9NS64 109 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 GSKIPQ9P0R6 139 aa7.6□□□□□ -1.19
VRK3-214ENST00000598553 DEFB131BA0A096LNP1 70 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 FAM24AA6NFZ4 105 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 TEX46H3BTG2 121 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 K7EPK0 472 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 OR5G3P0C626 314 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 S100A7P31151 101 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 CNN1P51911 297 aaKnown RBP7.59□□□□□ -1.19
VRK3-214ENST00000598553 PLP1P60201 277 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 PSG9Q00887 426 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 KIR3DS1Q14943 382 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 EBLN2Q6P2I7 272 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 UQCC3Q6UW78 93 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 BAP18Q8IXM2 172 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 AQP10Q96PS8 301 aa7.59□□□□□ -1.19
VRK3-214ENST00000598553 PARD6GQ9BYG4 376 aaPredicted RBP7.59□□□□□ -1.19
VRK3-214ENST00000598553 LSM5Q9Y4Y9 91 aaKnown RBP7.59□□□□□ -1.19
VRK3-214ENST00000598553 TRAV12-2A0A075B6T6 113 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 RAB19A4D1S5 217 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 TMEM189A5PLL7 270 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 SMIM9A6NGZ8 99 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 FNDC10F2Z333 226 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 SLC17A3O00476 420 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 AMBPP02760 352 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 TAS2R30P59541 319 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 SELENOTP62341 195 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 FAM222AQ5U5X8 452 aa7.58□□□□□ -1.2
VRK3-214ENST00000598553 PCNPQ8WW12 178 aaKnown RBP7.58□□□□□ -1.2
VRK3-214ENST00000598553 RNF126Q9BV68 326 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms