RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	LRP1B	Q9NZR2	4599 aa		7.38	□□□□□ -1.23
LSM4-205	ENST00000597776	MUC4	Q99102	2169 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	NBDY	A0A0U1RRE5	68 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	LINC00854	A0A1B0GVQ3	168 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	CCDC160	A6NGH7	325 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	MRPS12	O15235	138 aa	Known RBP	7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	NDUFB6	O95139	128 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	SCGB1D2	O95969	90 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	ATP5G1	P05496	136 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	ANXA7	P20073	488 aa	Known RBP	7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	ATP5G3	P48201	142 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	TAS2R60	P59551	318 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	SELENOT	P62341	195 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	DLK1	P80370	383 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	KIR3DS1	Q14943	382 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	TMEM14EP	Q6UXP3	125 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	LRRC20	Q8TCA0	184 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	RNF141	Q8WVD5	230 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	RPUSD4	Q96CM3	377 aa	Known RBP	7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	SMIM8	Q96KF7	97 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	PARD6G	Q9BYG4	376 aa	Predicted RBP	7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	SRR	Q9GZT4	340 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	ARV1	Q9H2C2	271 aa		7.37	□□□□□ -1.23
LSM4-205	ENST00000597776	CBY3	A6NI87	242 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776		H3BTX0	84 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776		K7EPK0	472 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	OR4E1	P0C645	316 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	ARL16	Q0P5N6	197 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	BAK1	Q16611	211 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	TMEM256	Q8N2U0	113 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	RNASE8	Q8TDE3	154 aa	Known RBP	7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	C16orf74	Q96GX8	76 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	NPVF	Q9HCQ7	196 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	NOP10	Q9NPE3	64 aa	Known RBP	7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	MGAT4C	Q9UBM8	478 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	LINC00588	Q9Y4M8	146 aa		7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	7.36	□□□□□ -1.23
LSM4-205	ENST00000597776	C16orf90	A8MZG2	172 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	PRAC2	D3DTV9	90 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	FNDC10	F2Z333	226 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	SLC17A3	O00476	420 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	GOSR2	O14653	212 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	CDKN1B	P46527	198 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	INPP1	P49441	399 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	CCL18	P55774	89 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	IAH1	Q2TAA2	248 aa	Predicted RBP	7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	C4orf46	Q504U0	113 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	SPANXN2	Q5MJ10	180 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	MORN5	Q5VZ52	161 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	TRIQK	Q629K1	86 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	TEPP	Q6URK8	271 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	LINC00305	Q7Z4B0	112 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	ZNF546	Q86UE3	836 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	C6orf223	Q8N319	242 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	OR10P1	Q8NGE3	313 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	ZNF331	Q9NQX6	463 aa	Predicted RBP	7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	GSKIP	Q9P0R6	139 aa		7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	RCL1	Q9Y2P8	373 aa	Known RBP	7.35	□□□□□ -1.23
LSM4-205	ENST00000597776	AGPAT2	O15120	278 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	BTC	P35070	178 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	CLINT1	Q14677	625 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	GFI1B	Q5VTD9	330 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	LCN15	Q6UWW0	184 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	SSX7	Q7RTT5	188 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	S100A7A	Q86SG5	101 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	TMEM263	Q8WUH6	116 aa	Known RBP	7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	MGST2	Q99735	147 aa		7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	RBM38	Q9H0Z9	239 aa	Known RBP	7.34	□□□□□ -1.23
LSM4-205	ENST00000597776	APOB	P04114	4563 aa	Known RBP	7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	NAP1L6	A6NFF2	107 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776		H7BYZ3	331 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776		J3KRW8	73 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	CCS	O14618	274 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	COX7A2P2	O60397	106 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	TSC22D2	O75157	780 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	MBP	P02686	304 aa	Predicted RBP	7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	CXCL2	P19875	107 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	TAS2R30	P59541	319 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	OR5I1	Q13606	314 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	OPCML	Q14982	345 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	ZNF493	Q6ZR52	646 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	TMEM37	Q8WXS4	190 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	SDHC	Q99643	169 aa	Predicted RBP	7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	SLC50A1	Q9BRV3	221 aa		7.33	□□□□□ -1.24
LSM4-205	ENST00000597776	TRAV26-1	A0A087WT03	109 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776		A0A0J9YY99	117 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	GAGE12B	A1L429	117 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	C7orf66	A4D0T2	115 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776		H3BQ15	152 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	GAGE7	O76087	117 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	GAGE12F	P0CL80	117 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	GAGE12G	P0CL81	117 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	GAGE12I	P0CL82	117 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	IGLC2	P0DOY2	106 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	HOXA5	P20719	270 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	PXDC1	Q5TGL8	231 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	BPIFA4P	Q86YQ2	179 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	OR10J6P	Q8NGY7	276 aa		7.32	□□□□□ -1.24
LSM4-205	ENST00000597776	MITD1	Q8WV92	249 aa		7.32	□□□□□ -1.24

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