RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 CDC34P49427 236 aaPredicted RBP10.65□□□□□ -0.7
VRK3-213ENST00000597215 TMEM41BQ5BJD5 291 aa10.65□□□□□ -0.7
VRK3-213ENST00000597215 AKR1C8PQ5T2L2 129 aa10.65□□□□□ -0.7
VRK3-213ENST00000597215 LINC00052Q96N35 136 aa10.65□□□□□ -0.7
VRK3-213ENST00000597215 CITED4Q96RK1 184 aa10.65□□□□□ -0.7
VRK3-213ENST00000597215 SLC50A1Q9BRV3 221 aa10.65□□□□□ -0.7
VRK3-213ENST00000597215 PAXXQ9BUH6 204 aa10.65□□□□□ -0.7
VRK3-213ENST00000597215 PYYP10082 97 aa10.64□□□□□ -0.71
VRK3-213ENST00000597215 TPT1P13693 172 aaKnown RBP10.64□□□□□ -0.71
VRK3-213ENST00000597215 ZNF124Q15973 351 aa10.64□□□□□ -0.71
VRK3-213ENST00000597215 BAP18Q8IXM2 172 aa10.64□□□□□ -0.71
VRK3-213ENST00000597215 C9orf62Q8N4C0 152 aa10.64□□□□□ -0.71
VRK3-213ENST00000597215 RPP25LQ8N5L8 163 aaKnown RBP10.64□□□□□ -0.71
VRK3-213ENST00000597215 STOML3Q8TAV4 291 aa10.64□□□□□ -0.71
VRK3-213ENST00000597215 B9D2Q9BPU9 175 aa10.64□□□□□ -0.71
VRK3-213ENST00000597215 OR51M1Q9H341 326 aa10.64□□□□□ -0.71
VRK3-213ENST00000597215 LOC102724200A0A096LPH7 203 aaPredicted RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 RBMY1BA6NDE4 496 aaKnown RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 RBMY1EA6NEQ0 496 aaKnown RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 H3BQ15 152 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 ZNF253O75346 499 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 SNRPCP09234 159 aaKnown RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 RBMY1DP0C7P1 496 aaKnown RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 SEC11BP0C7V7 166 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 PDE6HQ13956 83 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 PQLC2Q6ZP29 291 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 STHQ8IWL8 128 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 SAT2Q96F10 170 aaPredicted RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 ACTR3CQ9C0K3 210 aaPredicted RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 ZNF331Q9NQX6 463 aaPredicted RBP10.63□□□□□ -0.71
VRK3-213ENST00000597215 RPRMQ9NS64 109 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
VRK3-213ENST00000597215 TRBV19A0A075B6N1 114 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 TRAV8-2A0A0B4J237 113 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 H3BTX0 84 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 SLC17A3O00476 420 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 UBE2L3P68036 154 aaKnown RBP10.62□□□□□ -0.71
VRK3-213ENST00000597215 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
VRK3-213ENST00000597215 SLC51BQ86UW2 128 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 RNF141Q8WVD5 230 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 RAB24Q969Q5 203 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 FXYD5Q96DB9 178 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 CLEC5AQ9NY25 188 aa10.62□□□□□ -0.71
VRK3-213ENST00000597215 KNCNA6PVL3 124 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
VRK3-213ENST00000597215 OR10J4P0C629 311 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 NBEAP1P0C6P0 100 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 PSG9Q00887 426 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 PSG3Q16557 428 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 IGFL4Q6B9Z1 124 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 FOXI2Q6ZQN5 318 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 RNF182Q8N6D2 247 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 ZNF738Q8NE65 137 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 ZNF503Q96F45 646 aa10.61□□□□□ -0.71
VRK3-213ENST00000597215 CTXND1A0A1B0GTU2 59 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 UMAD1C9J7I0 102 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 HMGB3O15347 200 aaKnown RBP10.6□□□□□ -0.71
VRK3-213ENST00000597215 STAG3L2P0CL84 134 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 STAG3L3P0CL85 134 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 RPL35AP18077 110 aaKnown RBP10.6□□□□□ -0.71
VRK3-213ENST00000597215 HLA-DMBP28068 263 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 NKX2-5P52952 324 aaPredicted RBP10.6□□□□□ -0.71
VRK3-213ENST00000597215 APOC4P55056 127 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 EIF5AL1Q6IS14 154 aaKnown RBP10.6□□□□□ -0.71
VRK3-213ENST00000597215 EBLN2Q6P2I7 272 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 SAV1Q9H4B6 383 aaPredicted RBP10.6□□□□□ -0.71
VRK3-213ENST00000597215 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
VRK3-213ENST00000597215 AGRNO00468 2067 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 KIR2DL5BA0A0G2JN68 375 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 KIR2DL5BA0A0G2JPC4 375 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 NDUFB4O95168 129 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 ARL14EPLP0DKL9 152 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 HAGHQ16775 308 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
VRK3-213ENST00000597215 SBSPONQ8IVN8 264 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 KIR2DL5AQ8N109 375 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 TMED6Q8WW62 240 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 ASCL2Q99929 193 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 AAMDCQ9H7C9 122 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 PRELID1Q9Y255 219 aa10.59□□□□□ -0.71
VRK3-213ENST00000597215 A0A0J9YX75 114 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 H3BMM0 161 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 CXorf1O96002 111 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 DEFB1P60022 68 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 ZNF726P1Q15940 193 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 GDF5OSQ5U4N7 250 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 DPPA3Q6W0C5 159 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 RPUSD4Q96CM3 377 aaKnown RBP10.58□□□□□ -0.72
VRK3-213ENST00000597215 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
VRK3-213ENST00000597215 PHYHIPLQ96FC7 376 aa10.58□□□□□ -0.72
VRK3-213ENST00000597215 F6UB75 175 aa10.57□□□□□ -0.72
VRK3-213ENST00000597215 UBE2CO00762 179 aa10.57□□□□□ -0.72
VRK3-213ENST00000597215 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
VRK3-213ENST00000597215 NHLRC4P0CG21 123 aaPredicted RBP10.57□□□□□ -0.72
VRK3-213ENST00000597215 GCHFRP30047 84 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms