RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 A0A1W2PRE2 83 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 ICAM4Q14773 271 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 SHISA2Q6UWI4 295 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 SLC7A5P1Q8MH63 180 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 LINC00482Q8N8I6 264 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 RXFP4Q8TDU9 374 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 DYNLRB2Q8TF09 96 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 C17orf77Q96MU5 243 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 MLXQ9UH92 298 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 C11orf94C9JXX5 98 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 SLC17A3O00476 420 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 ATP5G3P48201 142 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 MEOX2P50222 304 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 RPL11P62913 178 aaKnown RBP11.09□□□□□ -0.63
VRK3-212ENST00000596814 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
VRK3-212ENST00000596814 MEF2BQ02080 365 aaPredicted RBP11.09□□□□□ -0.63
VRK3-212ENST00000596814 PEA15Q15121 130 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 SELENOKQ9Y6D0 94 aa11.09□□□□□ -0.63
VRK3-212ENST00000596814 GGTLC3B5MD39 225 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 ZNF253O75346 499 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 NDUFB4O95168 129 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 CD5P06127 495 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 RANP62826 216 aaKnown RBP11.08□□□□□ -0.64
VRK3-212ENST00000596814 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 UQCC3Q6UW78 93 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 EIF4E3Q8N5X7 224 aaKnown RBP11.08□□□□□ -0.64
VRK3-212ENST00000596814 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 Q9H3A6 140 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 SIGLEC8Q9NYZ4 499 aa11.08□□□□□ -0.64
VRK3-212ENST00000596814 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
VRK3-212ENST00000596814 NKX6-2Q9C056 277 aaPredicted RBP11.07□□□□□ -0.64
VRK3-212ENST00000596814 TREM1Q9NP99 234 aa11.07□□□□□ -0.64
VRK3-212ENST00000596814 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
VRK3-212ENST00000596814 CD81P60033 236 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 PSG9Q00887 426 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 LYPD1Q8N2G4 141 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 CITED4Q96RK1 184 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 SLC50A1Q9BRV3 221 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 SMDT1Q9H4I9 107 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 OTORQ9NRC9 128 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 SAP30O75446 220 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
VRK3-212ENST00000596814 EXOC3-AS1Q8N2X6 119 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 AAMDCQ9H7C9 122 aa11.06□□□□□ -0.64
VRK3-212ENST00000596814 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
VRK3-212ENST00000596814 STAB1Q9NY15 2570 aa11.05□□□□□ -0.64
VRK3-212ENST00000596814 PGPA6NDG6 321 aa11.05□□□□□ -0.64
VRK3-212ENST00000596814 DEFB114Q30KQ6 69 aa11.05□□□□□ -0.64
VRK3-212ENST00000596814 CCDC28AQ8IWP9 274 aa11.05□□□□□ -0.64
VRK3-212ENST00000596814 C16orf92Q96LL3 132 aa11.05□□□□□ -0.64
VRK3-212ENST00000596814 C9JQL5 133 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 PDE6DO43924 150 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 NDUFS6O75380 124 aaKnown RBP11.04□□□□□ -0.64
VRK3-212ENST00000596814 SAMD13Q5VXD3 122 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 GBGT1Q8N5D6 347 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 MS4A6AQ9H2W1 248 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 F6UZH7 168 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 SOCS3O14543 225 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
VRK3-212ENST00000596814 SRP19P09132 144 aaKnown RBP11.04□□□□□ -0.64
VRK3-212ENST00000596814 CD300EQ496F6 205 aaPredicted RBP11.04□□□□□ -0.64
VRK3-212ENST00000596814 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
VRK3-212ENST00000596814 TMEM61Q8N0U2 210 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 C5orf17Q8NAS9 161 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 CMTM2Q8TAZ6 248 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 TCEAL7Q9BRU2 100 aa11.04□□□□□ -0.64
VRK3-212ENST00000596814 TRAV8-2A0A0B4J237 113 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 SCO2A0A1W2PP80 73 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 TMEM250H0YL14 139 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
VRK3-212ENST00000596814 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 IGFL4Q6B9Z1 124 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 CYB561D1Q8N8Q1 229 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 DCANP1Q8TF63 244 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 SLC35B3Q9H1N7 401 aa11.03□□□□□ -0.64
VRK3-212ENST00000596814 TRAV25A0A0B4J276 109 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 M0R3E3 92 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 ISLRO14498 428 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 TSPAN4O14817 238 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 CD33P20138 364 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 TFPI2P48307 235 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 CEBPGP53567 150 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 GNG5P63218 68 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 WFDC3Q8IUB2 231 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 RNF182Q8N6D2 247 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 C11orf52Q96A22 123 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 CLEC5AQ9NY25 188 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 RPH3ALQ9UNE2 315 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 PRELID1Q9Y255 219 aa11.02□□□□□ -0.65
VRK3-212ENST00000596814 K7EQG2 157 aa11.01□□□□□ -0.65
VRK3-212ENST00000596814 PEX7O00628 323 aa11.01□□□□□ -0.65
VRK3-212ENST00000596814 SFTA3P0C7M3 94 aa11.01□□□□□ -0.65
VRK3-212ENST00000596814 SPATA3Q8NHX4 192 aa11.01□□□□□ -0.65
VRK3-212ENST00000596814 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
VRK3-212ENST00000596814 TRAV2A0A0B4J234 112 aa11.01□□□□□ -0.65
VRK3-212ENST00000596814 IGLV1-51P01701 117 aa11.01□□□□□ -0.65
VRK3-212ENST00000596814 ID1P41134 155 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms