RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 PSG3Q16557 428 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 RRN3P1Q2M238 152 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 LRRC37A5PQ49AS3 106 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 NRARPQ7Z6K4 114 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 UBE2DNLQ8IWF7 75 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 C2orf50Q96LR7 162 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 NIPSNAP3BQ9BS92 247 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 DKK2Q9UBU2 259 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 SLC45A2Q9UMX9 530 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 CRXO43186 299 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 DUSP14O95147 198 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 INSP01308 110 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 DEFB130BP0DP73 79 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 DEFB130AP0DP74 79 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 RPL7P18124 248 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 CXCL3P19876 107 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 CAMLGP49069 296 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 DAD1P61803 113 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 SELENOTP62341 195 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 OPCMLQ14982 345 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 C10orf113Q5VZT2 155 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 TMEM37Q8WXS4 190 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 IGF2BP2-AS1Q96M15 143 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 GPR82Q96P67 336 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 LINC01587Q99440 93 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 NDUFAF3Q9BU61 184 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 GPN1Q9HCN4 374 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 NDUFA13Q9P0J0 144 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 FRAS1Q86XX4 4008 aa7.34□□□□□ -1.23
SHKBP1-210ENST00000595874 BOLA2-SMG1P6H3BVE0 249 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 MRPS12O15235 138 aaKnown RBP7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 FGF7P21781 194 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 TAS2R30P59541 319 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 PLP1P60201 277 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 SPATA31B1PQ5VZV4 182 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 ZNF546Q86UE3 836 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 OR8A1Q8NGG7 326 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 ENKURQ8TC29 256 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 NEU1Q99519 415 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 C11orf1Q9H5F2 150 aa7.33□□□□□ -1.24
SHKBP1-210ENST00000595874 TMEM189A5PLL7 270 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 SMIM9A6NGZ8 99 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 H3BQ15 152 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 S100A7P31151 101 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 IFITM3Q01628 133 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 ERCC8Q13216 396 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 GCSAMLQ5JQS6 135 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 MZT2BQ6NZ67 158 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 TMEM88Q6PEY1 159 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 THAP6Q8TBB0 222 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 CCDC32Q9BV29 185 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 UQCC1Q9NVA1 299 aa7.32□□□□□ -1.24
SHKBP1-210ENST00000595874 A0A087X0K7 114 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 F5H768 121 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 EIF3GO75821 320 aaKnown RBP eCLIP7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 AMBPP02760 352 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 PYYP10082 97 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 PVALBP20472 110 aaPredicted RBP7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 NHLH2Q02577 135 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 CLINT1Q14677 625 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 SAMD13Q5VXD3 122 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 TMEM252Q8N6L7 170 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 BLNKQ8WV28 456 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 ZNF331Q9NQX6 463 aaPredicted RBP7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 OR5AC2Q9NZP5 309 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 WDR83OSQ9Y284 106 aa7.31□□□□□ -1.24
SHKBP1-210ENST00000595874 HECTD4Q9Y4D8 3996 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 A8MTW9 85 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 FNDC10F2Z333 226 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 NUDT3O95989 172 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 SULT1A1P50225 295 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 TCTAP57738 103 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 B2MP61769 119 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 ASAH1Q13510 395 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 RAB31Q13636 194 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 Q6ZRG5 221 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 BPIFA4PQ86YQ2 179 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 POM121L12Q8N7R1 296 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 CLUHP3Q96NS8 147 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 DNAJC4Q9NNZ3 241 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 LYRM2Q9NU23 88 aaPredicted RBP7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 SLC39A9Q9NUM3 307 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 ZNF586Q9NXT0 402 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 PXMP4Q9Y6I8 212 aa7.3□□□□□ -1.24
SHKBP1-210ENST00000595874 TRAV12-3A0A0B4J271 114 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 M0R3E3 92 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 UPK1BO75841 260 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 LCN15Q6UWW0 184 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 STX12Q86Y82 276 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 EXOC3-AS1Q8N2X6 119 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 OR10J6PQ8NGY7 276 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 S100ZQ8WXG8 99 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 GGACTQ9BVM4 153 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 SMIM3Q9BZL3 60 aa7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 NOP10Q9NPE3 64 aaKnown RBP7.29□□□□□ -1.24
SHKBP1-210ENST00000595874 PLAC8L1A1L4L8 177 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 INMT-MINDY4F8WBC2 141 aa7.28□□□□□ -1.24
SHKBP1-210ENST00000595874 H0YIZ8 118 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms