RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 JTBO76095 146 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 M6PRP20645 277 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 DEFB1P60022 68 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 RHOBP62745 196 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 ZNF345Q14585 488 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 GUK1Q16774 197 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 EBLN2Q6P2I7 272 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 FOXI2Q6ZQN5 318 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 TCTE3Q8IZS6 198 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 KCNRGQ8N5I3 272 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 RNF182Q8N6D2 247 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 OR2G3Q8NGZ4 309 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 GNPNAT1Q96EK6 184 aaPredicted RBP10.56□□□□□ -0.72
LIG1-208ENST00000595758 FAM167A-AS1Q96KT0 104 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 SAV1Q9H4B6 383 aaPredicted RBP10.56□□□□□ -0.72
LIG1-208ENST00000595758 RETNQ9HD89 108 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 AGRNO00468 2067 aa10.56□□□□□ -0.72
LIG1-208ENST00000595758 A0A0D9SG52 128 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 PYYP10082 97 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 HIST1H1EP10412 219 aaKnown RBP10.55□□□□□ -0.72
LIG1-208ENST00000595758 HLA-DRB4P13762 266 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 RAB2AP61019 212 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 SERF2P84101 59 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 PSG3Q16557 428 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 GDF5OSQ5U4N7 250 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 Q6ZWC4 215 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 ZNF738Q8NE65 137 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 OR10G4Q8NGN3 311 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 OR10G9Q8NGN4 311 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 OR10G7Q8NGN6 311 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 SLC50A1Q9BRV3 221 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 ZNF331Q9NQX6 463 aaPredicted RBP10.55□□□□□ -0.72
LIG1-208ENST00000595758 CYTL1Q9NRR1 136 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 ZNF586Q9NXT0 402 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 HLA-DRB4X5D2U9 266 aa10.55□□□□□ -0.72
LIG1-208ENST00000595758 TENM3Q9P273 2699 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 F6UB75 175 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 MBP02144 154 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 SPP1P10451 314 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 HLA-DMBP28068 263 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 MORN3Q6PF18 240 aaPredicted RBP10.54□□□□□ -0.72
LIG1-208ENST00000595758 AKAP14Q86UN6 197 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 SAT2Q96F10 170 aaPredicted RBP10.54□□□□□ -0.72
LIG1-208ENST00000595758 ARPC5LQ9BPX5 153 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 PAXXQ9BUH6 204 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 SH3BGRL3Q9H299 93 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 OR51M1Q9H341 326 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
LIG1-208ENST00000595758 A0A0J9YX75 114 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 A0A1W2PPV4 95 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 SLC17A3O00476 420 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 OR7C2O60412 319 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
LIG1-208ENST00000595758 IGKV3-20P01619 116 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 TAS2R45P59539 299 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 DEFB135Q30KP9 77 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 FAM122CQ6P4D5 195 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 RNF141Q8WVD5 230 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 OVOL2Q9BRP0 275 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 CLEC5AQ9NY25 188 aa10.53□□□□□ -0.72
LIG1-208ENST00000595758 HUWE1Q7Z6Z7 4374 aaKnown RBP10.52□□□□□ -0.73
LIG1-208ENST00000595758 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 KANTRA0A1W2PQU2 76 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 SPRY2O43597 315 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 ZNF253O75346 499 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 OR10J4P0C629 311 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 NBEAP1P0C6P0 100 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 NUTF2P61970 127 aaKnown RBP10.52□□□□□ -0.73
LIG1-208ENST00000595758 PDE6HQ13956 83 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 KHDC3LQ587J8 217 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 OR4B1Q8NGF8 309 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 RPUSD4Q96CM3 377 aaKnown RBP10.52□□□□□ -0.73
LIG1-208ENST00000595758 RNF183Q96D59 192 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 FXYD5Q96DB9 178 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 CLUHP3Q96NS8 147 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 TP53TG1Q9Y2A0 90 aa10.52□□□□□ -0.73
LIG1-208ENST00000595758 BCL2L11O43521 198 aa10.51□□□□□ -0.73
LIG1-208ENST00000595758 PFDN1O60925 122 aa10.51□□□□□ -0.73
LIG1-208ENST00000595758 EIF3GO75821 320 aaKnown RBP eCLIP10.51□□□□□ -0.73
LIG1-208ENST00000595758 DUSP14O95147 198 aaKnown RBP10.51□□□□□ -0.73
LIG1-208ENST00000595758 NDUFB4O95168 129 aa10.51□□□□□ -0.73
LIG1-208ENST00000595758 C1QBP02746 253 aa10.51□□□□□ -0.73
LIG1-208ENST00000595758 GIG44P09565 113 aaPredicted RBP10.51□□□□□ -0.73
LIG1-208ENST00000595758 PSG9Q00887 426 aa10.51□□□□□ -0.73
LIG1-208ENST00000595758 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
LIG1-208ENST00000595758 TMUB2Q71RG4 321 aa10.51□□□□□ -0.73
LIG1-208ENST00000595758 RPP25LQ8N5L8 163 aaKnown RBP10.51□□□□□ -0.73
LIG1-208ENST00000595758 ZNF705FA8MVS1 300 aaPredicted RBP10.5□□□□□ -0.73
LIG1-208ENST00000595758 ZNF705DP0CH99 300 aaPredicted RBP10.5□□□□□ -0.73
LIG1-208ENST00000595758 ZNF705BP0CI00 300 aaPredicted RBP10.5□□□□□ -0.73
LIG1-208ENST00000595758 C4BPBP20851 252 aa10.5□□□□□ -0.73
LIG1-208ENST00000595758 CDC34P49427 236 aaPredicted RBP10.5□□□□□ -0.73
LIG1-208ENST00000595758 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
LIG1-208ENST00000595758 OR8A1Q8NGG7 326 aa10.5□□□□□ -0.73
LIG1-208ENST00000595758 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
LIG1-208ENST00000595758 ZNF471Q9BX82 626 aaPredicted RBP10.5□□□□□ -0.73
LIG1-208ENST00000595758 ACTR3CQ9C0K3 210 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms