RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TMEM147Q9BVK8 224 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 DOK5Q9P104 306 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 MDFICQ9P1T7 246 aa9.65□□□□□ -0.86
SHKBP1-208ENST00000595726 TMEM189A5PLL7 270 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 CAV2P51636 162 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 PLP1P60201 277 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 S100A10P60903 97 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 RAB32Q13637 225 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 C17orf77Q96MU5 243 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 NEU1Q99519 415 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 GGACTQ9BVM4 153 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 SLC25A39Q9BZJ4 359 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 GPN1Q9HCN4 374 aaPredicted RBP9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
SHKBP1-208ENST00000595726 H3BMM0 161 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 ISLRO14498 428 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 PRAF2O60831 178 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 IGKV3-20P01619 116 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 PVALBP20472 110 aaPredicted RBP9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 S100A7P31151 101 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 ID1P41134 155 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 GALR1P47211 349 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 MEOX2P50222 304 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 BCAP31P51572 246 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 DEFB1P60022 68 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 RAP2BP61225 183 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 NUTF2P61970 127 aaKnown RBP9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 GPR82Q96P67 336 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 UHRF2Q96PU4 802 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 SHANK2-AS3Q9BTD1 123 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 LYRM2Q9NU23 88 aaPredicted RBP9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 HIGD1AQ9Y241 93 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 RFNGQ9Y644 331 aa9.63□□□□□ -0.87
SHKBP1-208ENST00000595726 FAM24AA6NFZ4 105 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 INMT-MINDY4F8WBC2 141 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 GOSR2O14653 212 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 AGPAT2O15120 278 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 HYPMO75409 117 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 CST7O76096 145 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 SAMD13Q5VXD3 122 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 ZNF546Q86UE3 836 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 FRZBQ92765 325 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 LINC00052Q96N35 136 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 MGST2Q99735 147 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 MARVELD1Q9BSK0 173 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 KRTAP1-5Q9BYS1 174 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 ARL6Q9H0F7 186 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 SAV1Q9H4B6 383 aaPredicted RBP9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 LINC00588Q9Y4M8 146 aa9.62□□□□□ -0.87
SHKBP1-208ENST00000595726 IGSF23A1L1A6 192 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 SMIM9A6NGZ8 99 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 SIX6O95475 246 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 NUDT3O95989 172 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 OR5G3P0C626 314 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 SULT1A1P50225 295 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 DEFA1P59665 94 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 DEFA3P59666 94 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 OXA1LQ15070 435 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 PATE2Q6UY27 113 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 FOXI2Q6ZQN5 318 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 C15orf53Q8NAA6 179 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 C16orf92Q96LL3 132 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 C20orf173Q96LM9 149 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 RSG1Q9BU20 258 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 ARV1Q9H2C2 271 aa9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 YTHDF2Q9Y5A9 579 aaKnown RBP9.61□□□□□ -0.87
SHKBP1-208ENST00000595726 J3QL48 77 aa9.6□□□□□ -0.87
SHKBP1-208ENST00000595726 DAD1P61803 113 aa9.6□□□□□ -0.87
SHKBP1-208ENST00000595726 VWC2Q2TAL6 325 aa9.6□□□□□ -0.87
SHKBP1-208ENST00000595726 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
SHKBP1-208ENST00000595726 TMEM252Q8N6L7 170 aa9.6□□□□□ -0.87
SHKBP1-208ENST00000595726 UQCC1Q9NVA1 299 aa9.6□□□□□ -0.87
SHKBP1-208ENST00000595726 A0A0J9YX75 114 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 F6UB75 175 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 RPL7P18124 248 aaKnown RBP9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 CAMLGP49069 296 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 S100A7AQ86SG5 101 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 STX12Q86Y82 276 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 CLUHP3Q96NS8 147 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 NMES1Q9C002 83 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 RPRMQ9NS64 109 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
SHKBP1-208ENST00000595726 A0A087X0K7 114 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 TRAV8-2A0A0B4J237 113 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 UBE2L5PA0A1B0GUS4 154 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 TEX48A0A1B0GUV7 120 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 LOC102723971A0A1B0GUV8 181 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 MRPS12O15235 138 aaKnown RBP9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 S100A11P31949 105 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 HBG1P69891 147 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 HBG2P69892 147 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 FGL1Q08830 312 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 SPATA31B1PQ5VZV4 182 aa9.58□□□□□ -0.88
SHKBP1-208ENST00000595726 LINC00305Q7Z4B0 112 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms