RNA–Protein interactions for RNA: ENST00000595112.5

KHSRP-204, Transcript of KH-type splicing regulatory protein, human

TSL 3

Gene KHSRP, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-204	ENST00000595112	TENM1	Q9UKZ4	2725 aa		12.01	□□□□□ -0.49
KHSRP-204	ENST00000595112	LOC102723971	A0A1B0GUV8	181 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	FAM74A7	A6NL05	159 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	PAGE4	O60829	102 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	RPL11	P62913	178 aa	Known RBP	12	□□□□□ -0.49
KHSRP-204	ENST00000595112	PSG9	Q00887	426 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	TOR2A	Q5JU69	321 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	ZNF506	Q5JVG8	444 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	FAM90A2P	Q658T7	463 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	COMMD7	Q86VX2	200 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	EIF5A2	Q9GZV4	153 aa	Known RBP	12	□□□□□ -0.49
KHSRP-204	ENST00000595112	SMDT1	Q9H4I9	107 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	NRN1	Q9NPD7	142 aa		12	□□□□□ -0.49
KHSRP-204	ENST00000595112	NDUFS6	O75380	124 aa	Known RBP	11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	UBE2G2	P60604	165 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	PAFAH1B2	P68402	229 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	MEF2B	Q02080	365 aa	Predicted RBP	11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	PEA15	Q15121	130 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	HAGH	Q16775	308 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	CST9LP1	Q5W188	147 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	OR2K2	Q8NGT1	345 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	TCEAL7	Q9BRU2	100 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	AAMDC	Q9H7C9	122 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	CLEC5A	Q9NY25	188 aa		11.99	□□□□□ -0.49
KHSRP-204	ENST00000595112	TRAV25	A0A0B4J276	109 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	SAP30	O75446	220 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	NDUFB4	O95168	129 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	INSL3	P51460	131 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	DEFB114	Q30KQ6	69 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	UQCC3	Q6UW78	93 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	EIF4E3	Q8N5X7	224 aa	Known RBP	11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	MCRIP2	Q9BUT9	160 aa	Known RBP	11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112		Q9H3A6	140 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	OTOR	Q9NRC9	128 aa		11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.98	□□□□□ -0.49
KHSRP-204	ENST00000595112	TRAV2	A0A0B4J234	112 aa		11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	C11orf94	C9JXX5	98 aa		11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	TSPAN4	O14817	238 aa		11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	SNRPC	P09234	159 aa	Known RBP	11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	CD33	P20138	364 aa		11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	RAN	P62826	216 aa	Known RBP	11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	ICAM4	Q14773	271 aa		11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	C17orf77	Q96MU5	243 aa		11.97	□□□□□ -0.49
KHSRP-204	ENST00000595112	GGTLC3	B5MD39	225 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112		H3BTX0	84 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	SLC17A3	O00476	420 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	PDE6D	O43924	150 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	C9orf66	Q5T8R8	295 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	ARL6IP6	Q8N6S5	226 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	C16orf92	Q96LL3	132 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	RARRES2	Q99969	163 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	MS4A6A	Q9H2W1	248 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112	PRELID1	Q9Y255	219 aa		11.96	□□□□□ -0.49
KHSRP-204	ENST00000595112		F6UZH7	168 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	DNASE2	O00115	360 aa	Predicted RBP	11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	ISLR	O14498	428 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	SOCS3	O14543	225 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	IGLV1-51	P01701	117 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	ID1	P41134	155 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	ATP5G3	P48201	142 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	SUMO1	P63165	101 aa	Known RBP	11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	CD300E	Q496F6	205 aa	Predicted RBP	11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	TMEM61	Q8N0U2	210 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	C5orf17	Q8NAS9	161 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	WFDC9	Q8NEX5	89 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	RXFP4	Q8TDU9	374 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	DCANP1	Q8TF63	244 aa		11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	MRPL53	Q96EL3	112 aa	Known RBP	11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	SPAG8	Q99932	426 aa	Predicted RBP	11.95	□□□□□ -0.5
KHSRP-204	ENST00000595112	IGKV3-7	A0A075B6H7	116 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	PGP	A6NDG6	321 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	TMEM250	H0YL14	139 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	CD81	P60033	236 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	LCN12	Q6JVE5	192 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	CCDC28A	Q8IWP9	274 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	CMTM2	Q8TAZ6	248 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	GPR61	Q9BZJ8	451 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	TREM1	Q9NP99	234 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112	COL6A5	A8TX70	2615 aa		11.94	□□□□□ -0.5
KHSRP-204	ENST00000595112		K7EQG2	157 aa		11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	SLC25A5	P05141	298 aa	Known RBP	11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	CSN1S1	P47710	185 aa		11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	SNRPD3	P62318	126 aa	Known RBP	11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	EXOC3-AS1	Q8N2X6	119 aa		11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	GBGT1	Q8N5D6	347 aa		11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	HIST1H2BA	Q96A08	127 aa		11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	MDFI	Q99750	246 aa		11.93	□□□□□ -0.5
KHSRP-204	ENST00000595112	STAB1	Q9NY15	2570 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	TRAV8-2	A0A0B4J237	113 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	SERTM2	A0A1B0GWG4	89 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	OR4C46	A6NHA9	309 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	C11orf52	Q96A22	123 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	RPUSD4	Q96CM3	377 aa	Known RBP	11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	SLC35B3	Q9H1N7	401 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	EPDR1	Q9UM22	224 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	SELENOK	Q9Y6D0	94 aa		11.92	□□□□□ -0.5
KHSRP-204	ENST00000595112	SRSF3	P84103	164 aa	Known RBP	11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms