RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 DEFB135Q30KP9 77 aa18.9■□□□□ 0.62
TRIM28-204ENST00000594806 C20orf173Q96LM9 149 aa18.9■□□□□ 0.62
TRIM28-204ENST00000594806 ZNF331Q9NQX6 463 aaPredicted RBP18.9■□□□□ 0.62
TRIM28-204ENST00000594806 FUT9Q9Y231 359 aa18.9■□□□□ 0.62
TRIM28-204ENST00000594806 BORCS7-ASMTA0A0B4J1R7 106 aa18.89■□□□□ 0.61
TRIM28-204ENST00000594806 TAAR5O14804 337 aa18.89■□□□□ 0.61
TRIM28-204ENST00000594806 ZNF253O75346 499 aa18.89■□□□□ 0.61
TRIM28-204ENST00000594806 HIST1H1EP10412 219 aaKnown RBP18.89■□□□□ 0.61
TRIM28-204ENST00000594806 ACOT6Q3I5F7 207 aaPredicted RBP18.89■□□□□ 0.61
TRIM28-204ENST00000594806 PSMG3Q9BT73 122 aaPredicted RBP18.89■□□□□ 0.61
TRIM28-204ENST00000594806 NBEAL2Q6ZNJ1 2754 aa18.88■□□□□ 0.61
TRIM28-204ENST00000594806 A0A0J9YX75 114 aa18.88■□□□□ 0.61
TRIM28-204ENST00000594806 RHOBP62745 196 aa18.88■□□□□ 0.61
TRIM28-204ENST00000594806 PSG3Q16557 428 aa18.88■□□□□ 0.61
TRIM28-204ENST00000594806 C1QTNF4Q9BXJ3 329 aa18.88■□□□□ 0.61
TRIM28-204ENST00000594806 STAB2Q8WWQ8 2551 aa18.88■□□□□ 0.61
TRIM28-204ENST00000594806 HMSDA8MTL9 139 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 H3BQ15 152 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 ARPC5O15511 151 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 PDE6HQ13956 83 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 OR2G3Q8NGZ4 309 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 SAT2Q96F10 170 aaPredicted RBP18.87■□□□□ 0.61
TRIM28-204ENST00000594806 SLC25A2Q9BXI2 301 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 MFFQ9GZY8 342 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 TENM3Q9P273 2699 aa18.87■□□□□ 0.61
TRIM28-204ENST00000594806 DUSP14O95147 198 aaKnown RBP18.86■□□□□ 0.61
TRIM28-204ENST00000594806 M6PRP20645 277 aa18.86■□□□□ 0.61
TRIM28-204ENST00000594806 TAS2R45P59539 299 aa18.86■□□□□ 0.61
TRIM28-204ENST00000594806 SERF2P84101 59 aa18.86■□□□□ 0.61
TRIM28-204ENST00000594806 GDF5OSQ5U4N7 250 aa18.86■□□□□ 0.61
TRIM28-204ENST00000594806 MIR17HGQ75NE6 70 aa18.86■□□□□ 0.61
TRIM28-204ENST00000594806 ZNF738Q8NE65 137 aa18.86■□□□□ 0.61
TRIM28-204ENST00000594806 GNPNAT1Q96EK6 184 aaPredicted RBP18.86■□□□□ 0.61
TRIM28-204ENST00000594806 FAM167A-AS1Q96KT0 104 aa18.86■□□□□ 0.61
TRIM28-204ENST00000594806 ZNF345Q14585 488 aa18.85■□□□□ 0.61
TRIM28-204ENST00000594806 IGFL4Q6B9Z1 124 aa18.85■□□□□ 0.61
TRIM28-204ENST00000594806 RNF182Q8N6D2 247 aa18.85■□□□□ 0.61
TRIM28-204ENST00000594806 HSD17B11Q8NBQ5 300 aa18.85■□□□□ 0.61
TRIM28-204ENST00000594806 OR51M1Q9H341 326 aa18.85■□□□□ 0.61
TRIM28-204ENST00000594806 EDA2RQ9HAV5 297 aa18.85■□□□□ 0.61
TRIM28-204ENST00000594806 ZNF586Q9NXT0 402 aa18.85■□□□□ 0.61
TRIM28-204ENST00000594806 TRBV19A0A075B6N1 114 aa18.84■□□□□ 0.61
TRIM28-204ENST00000594806 JTBO76095 146 aa18.84■□□□□ 0.61
TRIM28-204ENST00000594806 MBP02144 154 aa18.84■□□□□ 0.61
TRIM28-204ENST00000594806 GIG44P09565 113 aaPredicted RBP18.84■□□□□ 0.61
TRIM28-204ENST00000594806 ATP6V0CP27449 155 aa18.84■□□□□ 0.61
TRIM28-204ENST00000594806 OR4B1Q8NGF8 309 aa18.84■□□□□ 0.61
TRIM28-204ENST00000594806 A8MTW9 85 aa18.83■□□□□ 0.6
TRIM28-204ENST00000594806 SMLR1H3BR10 107 aa18.83■□□□□ 0.6
TRIM28-204ENST00000594806 DEFB1P60022 68 aa18.83■□□□□ 0.6
TRIM28-204ENST00000594806 PSG9Q00887 426 aa18.83■□□□□ 0.6
TRIM28-204ENST00000594806 PAXXQ9BUH6 204 aa18.83■□□□□ 0.6
TRIM28-204ENST00000594806 A0A1W2PPV4 95 aa18.82■□□□□ 0.6
TRIM28-204ENST00000594806 F6UB75 175 aa18.82■□□□□ 0.6
TRIM28-204ENST00000594806 C4BPBP20851 252 aa18.82■□□□□ 0.6
TRIM28-204ENST00000594806 KHDC3LQ587J8 217 aa18.82■□□□□ 0.6
TRIM28-204ENST00000594806 RPL7L1Q6DKI1 246 aaKnown RBP18.82■□□□□ 0.6
TRIM28-204ENST00000594806 RPUSD4Q96CM3 377 aaKnown RBP18.82■□□□□ 0.6
TRIM28-204ENST00000594806 SLC17A3O00476 420 aa18.81■□□□□ 0.6
TRIM28-204ENST00000594806 SNRPCP09234 159 aaKnown RBP18.81■□□□□ 0.6
TRIM28-204ENST00000594806 NBEAP1P0C6P0 100 aa18.81■□□□□ 0.6
TRIM28-204ENST00000594806 PYYP10082 97 aa18.81■□□□□ 0.6
TRIM28-204ENST00000594806 OR8A1Q8NGG7 326 aa18.81■□□□□ 0.6
TRIM28-204ENST00000594806 MRPL53Q96EL3 112 aaKnown RBP18.81■□□□□ 0.6
TRIM28-204ENST00000594806 RARRES2Q99969 163 aa18.81■□□□□ 0.6
TRIM28-204ENST00000594806 PRELID1Q9Y255 219 aa18.81■□□□□ 0.6
TRIM28-204ENST00000594806 A0A0D9SG52 128 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 H3BTX0 84 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 OR7C2O60412 319 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 HLA-DMBP28068 263 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 KCNRGQ8N5I3 272 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 OR10G4Q8NGN3 311 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 OR10G9Q8NGN4 311 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 OR10G7Q8NGN6 311 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 RNF141Q8WVD5 230 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 RFNGQ9Y644 331 aa18.8■□□□□ 0.6
TRIM28-204ENST00000594806 IGKV3-20P01619 116 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 CNN1P51911 297 aaKnown RBP18.79■□□□□ 0.6
TRIM28-204ENST00000594806 PQLC2Q6ZP29 291 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 TCTE3Q8IZS6 198 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 CSNK1G2-AS1Q8NCQ2 148 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 OR11H4Q8NGC9 324 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 OR11H2Q8NH07 326 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 FXYD5Q96DB9 178 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 ST6GAL2Q96JF0 529 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 AAMDCQ9H7C9 122 aa18.79■□□□□ 0.6
TRIM28-204ENST00000594806 NDUFB4O95168 129 aa18.78■□□□□ 0.6
TRIM28-204ENST00000594806 AMBPP02760 352 aa18.78■□□□□ 0.6
TRIM28-204ENST00000594806 RAB2AP61019 212 aa18.78■□□□□ 0.6
TRIM28-204ENST00000594806 ARPC5LQ9BPX5 153 aa18.78■□□□□ 0.6
TRIM28-204ENST00000594806 IL17DQ8TAD2 202 aa18.77■□□□□ 0.6
TRIM28-204ENST00000594806 BLNKQ8WV28 456 aa18.77■□□□□ 0.6
TRIM28-204ENST00000594806 XCL2Q9UBD3 114 aa18.77■□□□□ 0.6
TRIM28-204ENST00000594806 HIST1H1AQ02539 215 aaPredicted RBP18.76■□□□□ 0.59
TRIM28-204ENST00000594806 FAM122CQ6P4D5 195 aa18.76■□□□□ 0.59
TRIM28-204ENST00000594806 AMTNQ6UX39 209 aa18.76■□□□□ 0.59
TRIM28-204ENST00000594806 LYPD1Q8N2G4 141 aa18.76■□□□□ 0.59
TRIM28-204ENST00000594806 CYTL1Q9NRR1 136 aa18.76■□□□□ 0.59
TRIM28-204ENST00000594806 ZNF705EA8MWA4 302 aaPredicted RBP18.75■□□□□ 0.59
TRIM28-204ENST00000594806 OR10J4P0C629 311 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms