RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 MYOD1P15172 320 aa10□□□□□ -0.81
LIG1-207ENST00000594759 TMPRSS3P57727 454 aa10□□□□□ -0.81
LIG1-207ENST00000594759 SPANXN1Q5VSR9 72 aa10□□□□□ -0.81
LIG1-207ENST00000594759 SPATA25Q9BR10 227 aa10□□□□□ -0.81
LIG1-207ENST00000594759 TRAV40A0A0B4J280 105 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 FAM90A27PA6NNH2 459 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRRG2O14669 202 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 AGFG2O95081 481 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 Q6ZUT4 128 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 C2orf91Q6ZV80 131 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 IMMP1LQ96LU5 166 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 TTTY13Q9BZ97 58 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PCDH15Q96QU1 1955 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 IGLV3-12A0A075B6K2 115 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 FOXG1P55316 489 aaPredicted RBP9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRR20EP86478 221 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRR20CP86479 221 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRR20DP86480 221 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRR20BP86481 221 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRR20AP86496 221 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 Q6ZR03 302 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 GTSF1Q8WW33 167 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 GLMPQ8WWB7 406 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 ZNF785A8K8V0 405 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRSS2P07478 247 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 LOXL3P58215 753 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 PRCDQ00LT1 54 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 CEP295Q9C0D2 2601 aa9.99□□□□□ -0.81
LIG1-207ENST00000594759 C9JAW5 83 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 OSR1Q8TAX0 266 aaPredicted RBP9.98□□□□□ -0.81
LIG1-207ENST00000594759 CREBBPQ92793 2442 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 LYZL1Q6UWQ5 148 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 GCSAMQ8N6F7 178 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 HAX1O00165 279 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 UPK2O00526 184 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 FCN3O75636 299 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 TNFRSF1AP19438 455 aa9.98□□□□□ -0.81
LIG1-207ENST00000594759 ARFGEF3Q5TH69 2177 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 OTOGLQ3ZCN5 2332 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 OR13C6PQ8NH95 151 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 ZNF492Q9P255 531 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 FOXA2Q9Y261 457 aaPredicted RBP9.97□□□□□ -0.81
LIG1-207ENST00000594759 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.97□□□□□ -0.811e-7■■■■□ 22.1
LIG1-207ENST00000594759 TRAV2A0A0B4J234 112 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 NDUFS7O75251 213 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 IGHV4-39P01824 125 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 SHISA2Q6UWI4 295 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 TAL2Q16559 108 aa9.97□□□□□ -0.81
LIG1-207ENST00000594759 ZGRF1Q86YA3 2104 aa9.96□□□□□ -0.81
LIG1-207ENST00000594759 C9orf153Q5TBE3 101 aa9.96□□□□□ -0.81
LIG1-207ENST00000594759 ZNRF1Q8ND25 227 aa9.96□□□□□ -0.81
LIG1-207ENST00000594759 IGF2BP2-AS1Q96M15 143 aa9.96□□□□□ -0.81
LIG1-207ENST00000594759 FAM208BQ5VWN6 2430 aa9.96□□□□□ -0.81
LIG1-207ENST00000594759 FNDC10F2Z333 226 aa9.96□□□□□ -0.82
LIG1-207ENST00000594759 LTAP01374 205 aa9.96□□□□□ -0.82
LIG1-207ENST00000594759 EXOC3-AS1Q8N2X6 119 aa9.96□□□□□ -0.82
LIG1-207ENST00000594759 TMEM158Q8WZ71 300 aa9.96□□□□□ -0.82
LIG1-207ENST00000594759 MOGAT3Q86VF5 341 aa9.96□□□□□ -0.82
LIG1-207ENST00000594759 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
LIG1-207ENST00000594759 Q6ZSR3 168 aa9.95□□□□□ -0.82
LIG1-207ENST00000594759 FAM214BQ7L5A3 538 aa9.95□□□□□ -0.82
LIG1-207ENST00000594759 RPL27AP46776 148 aaKnown RBP9.95□□□□□ -0.82
LIG1-207ENST00000594759 PIEZO1Q92508 2521 aa9.95□□□□□ -0.82
LIG1-207ENST00000594759 GFRALQ6UXV0 394 aa9.95□□□□□ -0.82
LIG1-207ENST00000594759 PRR14LQ5THK1 2151 aa9.95□□□□□ -0.82
LIG1-207ENST00000594759 RPL32P62910 135 aaKnown RBP9.94□□□□□ -0.82
LIG1-207ENST00000594759 KLRB1Q12918 225 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 TEN1Q86WV5 123 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 KLF14Q8TD94 323 aaPredicted RBP9.94□□□□□ -0.82
LIG1-207ENST00000594759 ACACBO00763 2458 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 TMEM213A2RRL7 107 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 SAA2P0DJI9 122 aaPredicted RBP9.94□□□□□ -0.82
LIG1-207ENST00000594759 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 ABHD17AQ96GS6 310 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 HIGD1BQ9P298 99 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 NCOR2Q9Y618 2525 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 IGF2RP11717 2491 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 SAA1P0DJI8 122 aaPredicted RBP9.94□□□□□ -0.82
LIG1-207ENST00000594759 INSL3P51460 131 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 FDCSPQ8NFU4 85 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 PTH2Q96A98 100 aa9.94□□□□□ -0.82
LIG1-207ENST00000594759 IGLV2-8P01709 118 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 MGPP08493 103 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 PLNP26678 52 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 C3orf56Q8N813 242 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 PLXNB1O43157 2135 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 IGLV2-14P01704 120 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 MED13Q9UHV7 2174 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 E9PLD3 99 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 ZNF56Q15929 161 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 ASCL2Q99929 193 aa9.93□□□□□ -0.82
LIG1-207ENST00000594759 F5H697 171 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms