RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CACNA1BQ00975 2339 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 CA1P00915 261 aaPredicted RBP12.26□□□□□ -0.45
PNKP-204ENST00000594661 HARBI1Q96MB7 349 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 TNCP24821 2201 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 SIVA1O15304 175 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 FOXH1O75593 365 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 CRYGCP07315 174 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 PRCDQ00LT1 54 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 TEX45Q8NA69 505 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 OR9G4Q8NGQ1 327 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 OSR1Q8TAX0 266 aaPredicted RBP12.25□□□□□ -0.45
PNKP-204ENST00000594661 HSPB8Q9UJY1 196 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 HILPDAQ9Y5L2 63 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 COL12A1Q99715 3063 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.25□□□□□ -0.45
PNKP-204ENST00000594661 C1orf122Q6ZSJ8 110 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 OR5AN1Q8NGI8 311 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 C8orf46Q8TAG6 207 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 NABP2Q9BQ15 211 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 TMEM167BQ9NRX6 74 aa12.25□□□□□ -0.45
PNKP-204ENST00000594661 TEX50A0A1B0GTY4 177 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 VWC2LB2RUY7 222 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 PRB1P04280 392 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 ZNF137PP52743 207 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 SAMD5Q5TGI4 173 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 OR4X2Q8NGF9 303 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 SSMEM1Q8WWF3 244 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 RAB37Q96AX2 223 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 SIGLEC8Q9NYZ4 499 aa12.24□□□□□ -0.45
PNKP-204ENST00000594661 LSM4Q9Y4Z0 139 aaKnown RBP12.24□□□□□ -0.45
PNKP-204ENST00000594661 SNAI2O43623 268 aa12.23□□□□□ -0.45
PNKP-204ENST00000594661 TEPPQ6URK8 271 aa12.23□□□□□ -0.45
PNKP-204ENST00000594661 FLYWCH2Q96CP2 140 aaKnown RBP12.23□□□□□ -0.45
PNKP-204ENST00000594661 C1orf159Q96HA4 380 aa12.23□□□□□ -0.45
PNKP-204ENST00000594661 TMEM177Q53S58 311 aa12.23□□□□□ -0.45
PNKP-204ENST00000594661 LY6G5BQ8NDX9 201 aa12.23□□□□□ -0.45
PNKP-204ENST00000594661 ZNF418Q8TF45 676 aaPredicted RBP12.23□□□□□ -0.45
PNKP-204ENST00000594661 BBC3Q96PG8 261 aaPredicted RBP12.23□□□□□ -0.45
PNKP-204ENST00000594661 VGLL1Q99990 258 aa12.23□□□□□ -0.45
PNKP-204ENST00000594661 SSBP3Q9BWW4 388 aaPredicted RBP12.23□□□□□ -0.45
PNKP-204ENST00000594661 FLNCQ14315 2725 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 F8W1H4 67 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 STPG3Q8N7X2 389 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 IGLV1-47P01700 117 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 COX7A1P24310 79 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 OR4C13Q8NGP0 309 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 SPAG8Q99932 426 aaPredicted RBP12.22□□□□□ -0.45
PNKP-204ENST00000594661 MCRIP2Q9BUT9 160 aaKnown RBP12.22□□□□□ -0.45
PNKP-204ENST00000594661 ZFYVE26Q68DK2 2539 aa12.22□□□□□ -0.45
PNKP-204ENST00000594661 ASH1LQ9NR48 2969 aaKnown RBP12.21□□□□□ -0.45
PNKP-204ENST00000594661 A1L4Q6 167 aa12.21□□□□□ -0.45
PNKP-204ENST00000594661 RBP4P02753 201 aa12.21□□□□□ -0.45
PNKP-204ENST00000594661 PDPNQ86YL7 162 aa12.21□□□□□ -0.45
PNKP-204ENST00000594661 ZNF355PQ9NSJ1 428 aa12.21□□□□□ -0.45
PNKP-204ENST00000594661 ARHGAP32A7KAX9 2087 aa12.21□□□□□ -0.46
PNKP-204ENST00000594661 GGTLC3B5MD39 225 aa12.2□□□□□ -0.46
PNKP-204ENST00000594661 SMAD7O15105 426 aaKnown RBP12.2□□□□□ -0.46
PNKP-204ENST00000594661 IGHV3-72A0A0B4J1Y9 119 aa12.2□□□□□ -0.46
PNKP-204ENST00000594661 CAMPP49913 170 aa12.2□□□□□ -0.46
PNKP-204ENST00000594661 PSG5Q15238 335 aa12.2□□□□□ -0.46
PNKP-204ENST00000594661 OR1L8Q8NGR8 309 aa12.2□□□□□ -0.46
PNKP-204ENST00000594661 PSG8Q9UQ74 426 aa12.2□□□□□ -0.46
PNKP-204ENST00000594661 FNDC10F2Z333 226 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 SMIM13P0DJ93 91 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 FCGR2BP31994 310 aaPredicted RBP12.19□□□□□ -0.46
PNKP-204ENST00000594661 EFNA4P52798 201 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 C2orf83Q53S99 150 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 MIR17HGQ75NE6 70 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 RITA1Q96K30 269 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 GPR82Q96P67 336 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 HIGD1CA8MV81 97 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 BUB1B-PAK6H3BSN5 160 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 SLC25A17O43808 307 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 IGLV2-23P01705 113 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 RNASE2P10153 161 aaKnown RBP12.19□□□□□ -0.46
PNKP-204ENST00000594661 ATP5IP56385 69 aaPredicted RBP12.19□□□□□ -0.46
PNKP-204ENST00000594661 HBBP68871 147 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 MOB3BQ86TA1 216 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 TMEM167AQ8TBQ9 72 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 GTSF1Q8WW33 167 aa12.19□□□□□ -0.46
PNKP-204ENST00000594661 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
PNKP-204ENST00000594661 FOXA3P55318 350 aaPredicted RBP12.18□□□□□ -0.46
PNKP-204ENST00000594661 ERHP84090 104 aaKnown RBP12.18□□□□□ -0.46
PNKP-204ENST00000594661 PRR20EP86478 221 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 PRR20CP86479 221 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 PRR20DP86480 221 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 PRR20BP86481 221 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 PRR20AP86496 221 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 TTC9CQ8N5M4 171 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 FAM110AQ9BQ89 295 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 ERG28Q9UKR5 140 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 DOPEY1Q5JWR5 2465 aa12.18□□□□□ -0.46
PNKP-204ENST00000594661 SPTAN1Q13813 2472 aaKnown RBP12.18□□□□□ -0.46
PNKP-204ENST00000594661 AKAP6Q13023 2319 aa12.17□□□□□ -0.46
PNKP-204ENST00000594661 E7EUB6 86 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms