RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 C10orf99Q6UWK7 81 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 HIST3H2BBQ8N257 126 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 EEF1AKMT3Q96AZ1 226 aa10.25□□□□□ -0.77
VRK3-205ENST00000593919 ELOA3CA0A087WX78 387 aaPredicted RBP10.24□□□□□ -0.77
VRK3-205ENST00000593919 TRBV7-1A0A0A6YYK4 115 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 TOMM40O96008 361 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 IGHG4P01861 327 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 TYMSP04818 313 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 CLEC3BP05452 202 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 S100A2P29034 98 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 ADMP35318 185 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 IMMP2LQ96T52 175 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 CHRDL1Q9BU40 450 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 GPR61Q9BZJ8 451 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 GAR1Q9NY12 217 aaKnown RBP10.24□□□□□ -0.77
VRK3-205ENST00000593919 LY96Q9Y6Y9 160 aa10.24□□□□□ -0.77
VRK3-205ENST00000593919 NIPBLQ6KC79 2804 aaeCLIP10.24□□□□□ -0.77
VRK3-205ENST00000593919 PSMB8P28062 276 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 RAB9AP51151 201 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 PLP1P60201 277 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
VRK3-205ENST00000593919 LYZP61626 148 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 ACTL10Q5JWF8 245 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 CLEC19AQ6UXS0 136 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 ZNF418Q8TF45 676 aaPredicted RBP10.23□□□□□ -0.77
VRK3-205ENST00000593919 SCGB2A1O75556 95 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 HILS1P60008 231 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 ERVFC1-1P60608 527 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 FOXL1Q12952 345 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 FXYD5Q96DB9 178 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 USMG5Q96IX5 58 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 SERTAD4Q9NUC0 356 aa10.23□□□□□ -0.77
VRK3-205ENST00000593919 HYPMO75409 117 aa10.22□□□□□ -0.77
VRK3-205ENST00000593919 IL4P05112 153 aa10.22□□□□□ -0.77
VRK3-205ENST00000593919 RNASE1P07998 156 aaKnown RBP10.22□□□□□ -0.77
VRK3-205ENST00000593919 Q6ZSV7 163 aa10.22□□□□□ -0.77
VRK3-205ENST00000593919 ZNF491Q8N8L2 437 aa10.22□□□□□ -0.77
VRK3-205ENST00000593919 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
VRK3-205ENST00000593919 BLNKQ8WV28 456 aa10.22□□□□□ -0.77
VRK3-205ENST00000593919 IL36BQ9NZH7 164 aa10.22□□□□□ -0.77
VRK3-205ENST00000593919 IGHV3-35A0A0C4DH35 117 aa10.21□□□□□ -0.77
VRK3-205ENST00000593919 XKRY2A2RUG3 117 aa10.21□□□□□ -0.77
VRK3-205ENST00000593919 IGHV3-11P01762 117 aa10.21□□□□□ -0.77
VRK3-205ENST00000593919 MGST1P10620 155 aaKnown RBP10.21□□□□□ -0.77
VRK3-205ENST00000593919 RNF125Q96EQ8 232 aa10.21□□□□□ -0.77
VRK3-205ENST00000593919 BTF3L4Q96K17 158 aa10.21□□□□□ -0.77
VRK3-205ENST00000593919 CYSRT1A8MQ03 144 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 FABP4P15090 132 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 RPL15P61313 204 aaKnown RBP10.21□□□□□ -0.78
VRK3-205ENST00000593919 SLC35B1P78383 322 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 LEMD1Q68G75 181 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 NHLRC2Q8NBF2 726 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 ZNF414Q96IQ9 312 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 IGF2BP2-AS1Q96M15 143 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 LINC00479Q96M42 142 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 ATP6V0BQ99437 205 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 RNASE7Q9H1E1 156 aaKnown RBP10.21□□□□□ -0.78
VRK3-205ENST00000593919 GNB4Q9HAV0 340 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 TRAPPC1Q9Y5R8 145 aa10.21□□□□□ -0.78
VRK3-205ENST00000593919 A0A0G2JLM5 398 aa10.2□□□□□ -0.78
VRK3-205ENST00000593919 WI2-2373I1.2A0A1W2PRP0 233 aa10.2□□□□□ -0.78
VRK3-205ENST00000593919 TMEM89A2RUT3 159 aa10.2□□□□□ -0.78
VRK3-205ENST00000593919 TRBV12-3P01733 135 aa10.2□□□□□ -0.78
VRK3-205ENST00000593919 RANP62826 216 aaKnown RBP10.2□□□□□ -0.78
VRK3-205ENST00000593919 USF2Q15853 346 aaPredicted RBP10.2□□□□□ -0.78
VRK3-205ENST00000593919 RPEL1Q2QD12 228 aa10.2□□□□□ -0.78
VRK3-205ENST00000593919 MRPL27Q9P0M9 148 aaKnown RBP10.2□□□□□ -0.78
VRK3-205ENST00000593919 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
VRK3-205ENST00000593919 V9GYV3 84 aa10.2□□□□□ -0.78
VRK3-205ENST00000593919 TRAV34A0A0B4J273 112 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 PEX7O00628 323 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 IGLV2-8P01709 118 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 CNN1P51911 297 aaKnown RBP10.19□□□□□ -0.78
VRK3-205ENST00000593919 GNG5P63218 68 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 FOXE3Q13461 319 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 TMEM183AQ8IXX5 376 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 C2CD3Q4AC94 2353 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 TEP1Q99973 2627 aaKnown RBP10.19□□□□□ -0.78
VRK3-205ENST00000593919 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.19□□□□□ -0.78
VRK3-205ENST00000593919 H3BTX0 84 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 STXBP6Q8NFX7 210 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 SLC25A39Q9BZJ4 359 aaPredicted RBP10.19□□□□□ -0.78
VRK3-205ENST00000593919 RPH3ALQ9UNE2 315 aa10.19□□□□□ -0.78
VRK3-205ENST00000593919 IGHV3OR16-8A0A075B7F1 116 aa10.18□□□□□ -0.78
VRK3-205ENST00000593919 GCGP01275 180 aa10.18□□□□□ -0.78
VRK3-205ENST00000593919 SLC25A5P05141 298 aaKnown RBP10.18□□□□□ -0.78
VRK3-205ENST00000593919 ELANEP08246 267 aa10.18□□□□□ -0.78
VRK3-205ENST00000593919 ARL3P36405 182 aa10.18□□□□□ -0.78
VRK3-205ENST00000593919 PYY3Q5JQD4 70 aa10.18□□□□□ -0.78
VRK3-205ENST00000593919 OR4X2Q8NGF9 303 aa10.18□□□□□ -0.78
VRK3-205ENST00000593919 HIST1H2BLQ99880 126 aa10.18□□□□□ -0.78
VRK3-205ENST00000593919 PGPA6NDG6 321 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 GP9P14770 177 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 TAS2R60P59551 318 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 TOMM20LQ6UXN7 152 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 OR8I2Q8N0Y5 310 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 KLHDC1Q8N7A1 406 aa10.17□□□□□ -0.78
VRK3-205ENST00000593919 MYOZ3Q8TDC0 251 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms