RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PYDC2Q56P42 97 aa11.39□□□□□ -0.59
LIG1-205ENST00000593425 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
LIG1-205ENST00000593425 RNASE8Q8TDE3 154 aaKnown RBP11.39□□□□□ -0.59
LIG1-205ENST00000593425 KRTAP1-5Q9BYS1 174 aa11.39□□□□□ -0.59
LIG1-205ENST00000593425 NOP10Q9NPE3 64 aaKnown RBP11.39□□□□□ -0.59
LIG1-205ENST00000593425 PSENENQ9NZ42 101 aa11.39□□□□□ -0.59
LIG1-205ENST00000593425 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
LIG1-205ENST00000593425 MRPS12O15235 138 aaKnown RBP11.38□□□□□ -0.59
LIG1-205ENST00000593425 CDKN1BP46527 198 aa11.38□□□□□ -0.59
LIG1-205ENST00000593425 RRAS2P62070 204 aaPredicted RBP11.38□□□□□ -0.59
LIG1-205ENST00000593425 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
LIG1-205ENST00000593425 PATE2Q6UY27 113 aa11.38□□□□□ -0.59
LIG1-205ENST00000593425 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
LIG1-205ENST00000593425 SSSCA1O60232 199 aa11.37□□□□□ -0.59
LIG1-205ENST00000593425 SNRPCP09234 159 aaKnown RBP11.37□□□□□ -0.59
LIG1-205ENST00000593425 CLINT1Q14677 625 aa11.37□□□□□ -0.59
LIG1-205ENST00000593425 LRRC20Q8TCA0 184 aa11.37□□□□□ -0.59
LIG1-205ENST00000593425 TMEM263Q8WUH6 116 aaKnown RBP11.37□□□□□ -0.59
LIG1-205ENST00000593425 RPUSD4Q96CM3 377 aaKnown RBP11.37□□□□□ -0.59
LIG1-205ENST00000593425 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
LIG1-205ENST00000593425 ARL6Q9H0F7 186 aa11.37□□□□□ -0.59
LIG1-205ENST00000593425 Q9H8V8 135 aa11.37□□□□□ -0.59
LIG1-205ENST00000593425 DNAH5Q8TE73 4624 aa11.37□□□□□ -0.59
LIG1-205ENST00000593425 SELENOTP62341 195 aa11.36□□□□□ -0.59
LIG1-205ENST00000593425 SLC38A11Q08AI6 406 aa11.36□□□□□ -0.59
LIG1-205ENST00000593425 ZNF493Q6ZR52 646 aa11.36□□□□□ -0.59
LIG1-205ENST00000593425 SPATA12Q7Z6I5 190 aa11.36□□□□□ -0.59
LIG1-205ENST00000593425 LINC00612Q8N6U2 182 aa11.36□□□□□ -0.59
LIG1-205ENST00000593425 ARV1Q9H2C2 271 aa11.36□□□□□ -0.59
LIG1-205ENST00000593425 TRAV26-1A0A087WT03 109 aa11.35□□□□□ -0.59
LIG1-205ENST00000593425 C9orf170A2RU37 121 aa11.35□□□□□ -0.59
LIG1-205ENST00000593425 NOL3O60936 208 aaKnown RBP11.35□□□□□ -0.59
LIG1-205ENST00000593425 METTL15P1P0C7V9 234 aa11.35□□□□□ -0.59
LIG1-205ENST00000593425 DLK1P80370 383 aa11.35□□□□□ -0.59
LIG1-205ENST00000593425 OR5I1Q13606 314 aa11.35□□□□□ -0.59
LIG1-205ENST00000593425 TMEM14EPQ6UXP3 125 aa11.35□□□□□ -0.59
LIG1-205ENST00000593425 ZNF331Q9NQX6 463 aaPredicted RBP11.35□□□□□ -0.59
LIG1-205ENST00000593425 H7BYZ3 331 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 K7EPK0 472 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 ANXA7P20073 488 aaKnown RBP11.34□□□□□ -0.59
LIG1-205ENST00000593425 HOXA5P20719 270 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 LCN15Q6UWW0 184 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 Q8N1X5 172 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 DEDD2Q8WXF8 326 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
LIG1-205ENST00000593425 SMIM8Q96KF7 97 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 NPVFQ9HCQ7 196 aa11.34□□□□□ -0.59
LIG1-205ENST00000593425 A0A0J9YY99 117 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 PRAC2D3DTV9 90 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 H3BTX0 84 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 ZNF701M0R085 212 aaPredicted RBP11.33□□□□□ -0.6
LIG1-205ENST00000593425 SLC17A3O00476 420 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 CXCL2P19875 107 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 KRTAP10-2P60368 255 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 UBE2MP61081 183 aaKnown RBP11.33□□□□□ -0.6
LIG1-205ENST00000593425 GFI1BQ5VTD9 330 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 TEPPQ6URK8 271 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 RXFP4Q8TDU9 374 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 SLC50A1Q9BRV3 221 aa11.33□□□□□ -0.6
LIG1-205ENST00000593425 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 FNDC10F2Z333 226 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 GAGE7O76087 117 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 SCGB1D2O95969 90 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 M6PRP20645 277 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 ARL16Q0P5N6 197 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 ESRGQ1W209 222 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 MORN5Q5VZ52 161 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 LINC00305Q7Z4B0 112 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 S100A7AQ86SG5 101 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 ZBTB8BQ8NAP8 495 aaPredicted RBP11.32□□□□□ -0.6
LIG1-205ENST00000593425 UPK3BQ9BT76 320 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 Q9H3A6 140 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 MGAT4CQ9UBM8 478 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 FLVCR2Q9UPI3 526 aa11.32□□□□□ -0.6
LIG1-205ENST00000593425 AGPAT2O15120 278 aa11.31□□□□□ -0.6
LIG1-205ENST00000593425 TTC32Q5I0X7 151 aa11.31□□□□□ -0.6
LIG1-205ENST00000593425 CCDC190Q86UF4 302 aa11.31□□□□□ -0.6
LIG1-205ENST00000593425 OR10P1Q8NGE3 313 aa11.31□□□□□ -0.6
LIG1-205ENST00000593425 ZNF503Q96F45 646 aa11.31□□□□□ -0.6
LIG1-205ENST00000593425 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
LIG1-205ENST00000593425 J3KRW8 73 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 GOSR2O14653 212 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 NDUFB6O95139 128 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 RLN2P04090 185 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 PXDC1Q5TGL8 231 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 ZNF546Q86UE3 836 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 CCDC28AQ8IWP9 274 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 TMEM37Q8WXS4 190 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 RNF24Q9Y225 148 aa11.3□□□□□ -0.6
LIG1-205ENST00000593425 RCL1Q9Y2P8 373 aaKnown RBP11.3□□□□□ -0.6
LIG1-205ENST00000593425 LINC00854A0A1B0GVQ3 168 aa11.29□□□□□ -0.6
LIG1-205ENST00000593425 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
LIG1-205ENST00000593425 TSC22D2O75157 780 aa11.29□□□□□ -0.6
LIG1-205ENST00000593425 OR4E1P0C645 316 aa11.29□□□□□ -0.6
LIG1-205ENST00000593425 IGLC2P0DOY2 106 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms