RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 FAM223BA6NKX1 122 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 PPIFP30405 207 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 PYY3Q5JQD4 70 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 C10orf55Q5SWW7 151 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 FAM223AQ8IWN6 122 aa10.82□□□□□ -0.68
SMARCA4-216ENST00000591545 ADARB2-AS1A8MUL3 147 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 GAGE2BQ13066 116 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 GAGE2EQ4V326 116 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 Q6P435 159 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 C1QTNF4Q9BXJ3 329 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 GAGE2DQ9UEU5 116 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 ZNF407Q9C0G0 2248 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 H0YJW9 148 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 SYS1-DBNDD2H3BUS1 97 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 TOMM40O96008 361 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 PLA2G5P39877 138 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 PSG3Q16557 428 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 SCRT1Q9BWW7 348 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 PROK2Q9HC23 129 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 ABCA1O95477 2261 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 WNK2Q9Y3S1 2297 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 VCYO14598 125 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.81□□□□□ -0.689e-7■■■■□ 22.9
SMARCA4-216ENST00000591545 IGKV2-40A0A087WW87 121 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 IGKV2D-40P01614 121 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 CADP27708 2225 aa10.81□□□□□ -0.68
SMARCA4-216ENST00000591545 TRAV12-3A0A0B4J271 114 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 GUSBP1Q15486 140 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 Q8TCH9 128 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 PHLDA1Q8WV24 401 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 RSPO3Q9BXY4 272 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 C15orf62A8K5M9 175 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 ZFAND6Q6FIF0 208 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 IGHV2-70DA0A0C4DH43 119 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 GATA4P43694 442 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 TMEM256Q8N2U0 113 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 RASL10AQ92737 203 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 Q0VG73 95 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 Q71RC1 249 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 DLX4Q92988 240 aaPredicted RBP10.8□□□□□ -0.68
SMARCA4-216ENST00000591545 KIAA1671Q9BY89 1806 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 SH2D1AO60880 128 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 CKS1BP61024 79 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 S100A7L2Q5SY68 101 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 RUSC1-AS1Q66K80 236 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 CD5LO43866 347 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 NTF4P34130 210 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 UBE2V1Q13404 147 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 SIGLEC9Q9Y336 463 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 PTPRQQ9UMZ3 2332 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 RIPPLY3P57055 190 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 PDE6HQ13956 83 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 RFNGQ9Y644 331 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 KLF2Q9Y5W3 355 aaPredicted RBP10.79□□□□□ -0.68
SMARCA4-216ENST00000591545 PRB1P04280 392 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 PRADC1Q9BSG0 188 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 FER1L5A0AVI2 2057 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 IGKV3D-20A0A0C4DH25 116 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 NCR2O95944 276 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 ZNF415Q09FC8 603 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 TEX43Q6ZNM6 134 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 VGLL1Q99990 258 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 SPANXA1Q9NS26 97 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 ZNF492Q9P255 531 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 C5orf63A6NC05 138 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 WT1P19544 449 aaPredicted RBP10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 CHCHD5Q9BSY4 110 aa10.78□□□□□ -0.68
SMARCA4-216ENST00000591545 MPDZO75970 2070 aa10.77□□□□□ -0.68
SMARCA4-216ENST00000591545 ZNF688P0C7X2 276 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 RPL36AP83881 106 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 RPL36ALQ969Q0 106 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 C20orf144Q9BQM9 153 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 RNASE2P10153 161 aaKnown RBP10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 CFHR2P36980 270 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 CT83Q5H943 113 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 DMRTC2Q8IXT2 367 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 TRAV3A0A0B4J244 114 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 LINC00473A8K010 186 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 LINC00158P58513 81 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 SSBP2P81877 361 aaPredicted RBP10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 Q86TA4 180 aa10.77□□□□□ -0.69
SMARCA4-216ENST00000591545 CREBBPQ92793 2442 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 E9PQ18 207 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 RPL35AP18077 110 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 IGFL2Q6UWQ7 119 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 RCHY1Q96PM5 261 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 MCRIP2Q9BUT9 160 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 ADCYAP1P18509 176 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 RPL15P61313 204 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 ZNF876PQ49A33 203 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 MPV17L2Q567V2 206 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 ANAPC10Q9UM13 185 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 PLXNB3Q9ULL4 1909 aa10.76□□□□□ -0.69
SMARCA4-216ENST00000591545 hDV102S1A0JD36 115 aa10.75□□□□□ -0.69
SMARCA4-216ENST00000591545 ESDP10768 282 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms