RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MAP6D1Q9H9H5 199 aa6.97□□□□□ -1.29
BRCA1-226ENST00000591534 ALMS1Q8TCU4 4167 aa6.97□□□□□ -1.29
BRCA1-226ENST00000591534 A0A087WWL8 130 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 YIF1AO95070 293 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 TMEM50AO95807 157 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 FGF7P21781 194 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 GCSHP23434 173 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 RPL29P47914 159 aaKnown RBP6.96□□□□□ -1.3
BRCA1-226ENST00000591534 MFAP4P55083 255 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 TAS2R45P59539 299 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 WT1-ASQ06250 92 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 ODF3L2Q3SX64 289 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 OR1L4Q8NGR5 311 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 OR4X1Q8NH49 305 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 C11orf45Q8TAV5 145 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 RARRES2Q99969 163 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 SMPXQ9UHP9 88 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 WDR83OSQ9Y284 106 aa6.96□□□□□ -1.3
BRCA1-226ENST00000591534 UBE2L5PA0A1B0GUS4 154 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 A0A1W2PPV4 95 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 ZFP92A6NM28 416 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 CAMLGP49069 296 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 SULT1A2P50226 295 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 MFAP2P55001 183 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 ICAM4Q14773 271 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 RPL7L1Q6DKI1 246 aaKnown RBP6.95□□□□□ -1.3
BRCA1-226ENST00000591534 BPIFCQ8NFQ6 507 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 SUN5Q8TC36 379 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 C2CD4CQ8TF44 421 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 TRGV9Q99603 122 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 PBDC1Q9BVG4 233 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 NPCDR1Q9BY65 106 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 SMIM3Q9BZL3 60 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 SMDT1Q9H4I9 107 aa6.95□□□□□ -1.3
BRCA1-226ENST00000591534 IGHV3-21A0A0B4J1V1 117 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 IGHV7-4-1A0A0J9YVY3 117 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 PMS2P5A8MQ11 134 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 C11orf94C9JXX5 98 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 GNG7O60262 68 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 IFNA1P01562 189 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 M6PRP20645 277 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 YPEL3P61236 119 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-226ENST00000591534 RHOBP62745 196 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 TMEM41BQ5BJD5 291 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 SPINK9Q5DT21 86 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 CLLU1Q5K131 121 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 RPP25LQ8N5L8 163 aaKnown RBP6.94□□□□□ -1.3
BRCA1-226ENST00000591534 HSD17B11Q8NBQ5 300 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 OR11H2Q8NH07 326 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 NARS2Q96I59 477 aaKnown RBP6.94□□□□□ -1.3
BRCA1-226ENST00000591534 CHRDL1Q9BU40 450 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 RHPN1-AS1Q9BWJ2 59 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 MRPL32Q9BYC8 188 aaKnown RBP6.94□□□□□ -1.3
BRCA1-226ENST00000591534 ACTR3CQ9C0K3 210 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-226ENST00000591534 C11orf68Q9H3H3 251 aaKnown RBP6.94□□□□□ -1.3
BRCA1-226ENST00000591534 TMEM231Q9H6L2 316 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 CYTL1Q9NRR1 136 aa6.94□□□□□ -1.3
BRCA1-226ENST00000591534 ZNF705EA8MWA4 302 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-226ENST00000591534 PRSS46E5RG02 174 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 DNASE2O00115 360 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-226ENST00000591534 CHEK1O14757 476 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 ZNF207O43670 478 aaKnown RBP6.93□□□□□ -1.3
BRCA1-226ENST00000591534 CLN5O75503 358 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 CTSGP08311 255 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 ATP6V0CP27449 155 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 TFPI2P48307 235 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 B2MP61769 119 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 GAMTQ14353 236 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 APRG1Q8IVJ8 170 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 THAP8Q8NA92 274 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 Q8WTZ3 238 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 TXNDC17Q9BRA2 123 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 MED9Q9NWA0 146 aa6.93□□□□□ -1.3
BRCA1-226ENST00000591534 IGHV3OR16-8A0A075B7F1 116 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 TRAV2A0A0B4J234 112 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 TRAV1-1A0A0B4J248 108 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 K7EIM0 57 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 AGPAT2O15120 278 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 NDUFS6O75380 124 aaKnown RBP6.92□□□□□ -1.3
BRCA1-226ENST00000591534 CA1P00915 261 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-226ENST00000591534 OR10J1P30954 320 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 TMED6Q8WW62 240 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 ACY3Q96HD9 319 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 ZNF414Q96IQ9 312 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 NKX6-2Q9C056 277 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-226ENST00000591534 SLC39A9Q9NUM3 307 aa6.92□□□□□ -1.3
BRCA1-226ENST00000591534 IGKV3-7A0A075B6H7 116 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 CTXND1A0A1B0GTU2 59 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 A0A1W2PS18 150 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 I3L2K1 104 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 RD3LP0DJH9 198 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 BTF3P20290 206 aaKnown RBP6.91□□□□□ -1.3
BRCA1-226ENST00000591534 PSMB3P49720 205 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 MEOX2P50222 304 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 RND2P52198 227 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 NANOS2P60321 138 aaKnown RBP6.91□□□□□ -1.3
BRCA1-226ENST00000591534 FFAR4Q5NUL3 377 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 SAMD13Q5VXD3 122 aa6.91□□□□□ -1.3
BRCA1-226ENST00000591534 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms