RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
RPRD1A-209ENST00000590898 FAM90A2PQ658T7 463 aa12.88□□□□□ -0.35
RPRD1A-209ENST00000590898 C16orf54Q6UWD8 224 aa12.88□□□□□ -0.35
RPRD1A-209ENST00000590898 RNF2Q99496 336 aa12.88□□□□□ -0.35
RPRD1A-209ENST00000590898 IGHV3OR16-13A0A075B7E8 117 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 IGHV3-74A0A0B4J1X5 117 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 TRAV5A0A0B4J249 113 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 ZNF98A6NK75 572 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 COX7A2P2O60397 106 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 PAGE4O60829 102 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 UBE2G2P60604 165 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 C10orf113Q5VZT2 155 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 ZNF503Q96F45 646 aa12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 SLC25A39Q9BZJ4 359 aaPredicted RBP12.87□□□□□ -0.35
RPRD1A-209ENST00000590898 G3V4G9 280 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 CD81P60033 236 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 LCN12Q6JVE5 192 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 SHANK2-AS3Q9BTD1 123 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 VAX2Q9UIW0 290 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 H3BRN7 92 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 CXorf1O96002 111 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 RBPMS2Q6ZRY4 209 aaKnown RBP12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 LINC00305Q7Z4B0 112 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 GLMPQ8WWB7 406 aa12.86□□□□□ -0.35
RPRD1A-209ENST00000590898 IGHV3-66A0A0C4DH42 116 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 HELTA6NFD8 242 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 TSPAN4O14817 238 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 IFNA1P01562 189 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 GCHFRP30047 84 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 PMS2P11Q13670 270 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 KPRPQ5T749 579 aaPredicted RBP12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 TMEM61Q8N0U2 210 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 GPR82Q96P67 336 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 SMDT1Q9H4I9 107 aa12.85□□□□□ -0.35
RPRD1A-209ENST00000590898 ATP5G3P48201 142 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 TCF24Q7RTU0 167 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 OR8I2Q8N0Y5 310 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 SLC25A2Q9BXI2 301 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 MANBALQ9NQG1 85 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 DNAH3Q8TD57 4116 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 PSMB3P49720 205 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 SVBPQ8N300 66 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 FAM167A-AS1Q96KT0 104 aa12.84□□□□□ -0.35
RPRD1A-209ENST00000590898 IZUMO1RA6ND01 250 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 ZNF785A8K8V0 405 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 OR7C2O60412 319 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 OR10J4P0C629 311 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 PAFAH1B2P68402 229 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 BEAN1Q3B7T3 259 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 SOHLH1Q5JUK2 328 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 SIGLEC15Q6ZMC9 328 aa12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 SPAG8Q99932 426 aaPredicted RBP12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 YTHDF2Q9Y5A9 579 aaKnown RBP12.83□□□□□ -0.36
RPRD1A-209ENST00000590898 RPL7P18124 248 aaKnown RBP12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 LEMD1Q68G75 181 aa12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 MRPL32Q9BYC8 188 aaKnown RBP12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 NKX6-2Q9C056 277 aaPredicted RBP12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 SNRPCP09234 159 aaKnown RBP12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 PYYP10082 97 aa12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 CST9LP1Q5W188 147 aa12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 ZNF256Q9Y2P7 627 aaPredicted RBP12.82□□□□□ -0.36
RPRD1A-209ENST00000590898 TRAV2A0A0B4J234 112 aa12.81□□□□□ -0.36
RPRD1A-209ENST00000590898 C11orf94C9JXX5 98 aa12.81□□□□□ -0.36
RPRD1A-209ENST00000590898 GALR1P47211 349 aa12.81□□□□□ -0.36
RPRD1A-209ENST00000590898 RPL11P62913 178 aaKnown RBP12.81□□□□□ -0.36
RPRD1A-209ENST00000590898 GP9P14770 177 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 KRTAP10-11P60412 298 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 BTN1A1Q13410 526 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 BPIFA4PQ86YQ2 179 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 SELENOKQ9Y6D0 94 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 FAM74A7A6NL05 159 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 TAS2R45P59539 299 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 CLRN3Q8NCR9 226 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 MS4A6AQ9H2W1 248 aa12.8□□□□□ -0.36
RPRD1A-209ENST00000590898 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
RPRD1A-209ENST00000590898 AKR1C3P42330 323 aa12.79□□□□□ -0.36
RPRD1A-209ENST00000590898 FAM74A3Q4VXF1 159 aa12.79□□□□□ -0.36
RPRD1A-209ENST00000590898 PQLC2Q6ZP29 291 aa12.79□□□□□ -0.36
RPRD1A-209ENST00000590898 NRN1Q9NPD7 142 aa12.79□□□□□ -0.36
RPRD1A-209ENST00000590898 H3BQ15 152 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 DNASE2O00115 360 aaPredicted RBP12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 MRPS12O15235 138 aaKnown RBP12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 SNAPINO95295 136 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 MEOX2P50222 304 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 UBE2L3P68036 154 aaKnown RBP12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 STXBP6Q8NFX7 210 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 RPUSD4Q96CM3 377 aaKnown RBP12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 SAMD13Q5VXD3 122 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 TMEM88Q6PEY1 159 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 DCANP1Q8TF63 244 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 TMEM14CQ9P0S9 112 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 SMAD5-AS1Q9Y6J3 95 aa12.78□□□□□ -0.36
RPRD1A-209ENST00000590898 IGKV3-7A0A075B6H7 116 aa12.77□□□□□ -0.37
RPRD1A-209ENST00000590898 M0R036 132 aa12.77□□□□□ -0.37
RPRD1A-209ENST00000590898 TAGLN2P37802 199 aaKnown RBP12.77□□□□□ -0.37
RPRD1A-209ENST00000590898 CMC4P56277 68 aaPredicted RBP12.77□□□□□ -0.37
RPRD1A-209ENST00000590898 FAM110AQ9BQ89 295 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms