RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FAM213BQ8TBF2 198 aa10.18□□□□□ -0.78
VMP1-210ENST00000589823 AURKAIP1Q9NWT8 199 aaPredicted RBP10.18□□□□□ -0.78
VMP1-210ENST00000589823 OR11H12B2RN74 326 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 H3BQ15 152 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 H3BTX0 84 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 ISLRO14498 428 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 CXorf1O96002 111 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 OR10J4P0C629 311 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 NBEAP1P0C6P0 100 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 ARL14EPLP0DKL9 152 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 PSMB3P49720 205 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 SULT1A2P50226 295 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 ZNF726P1Q15940 193 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 BLNKQ8WV28 456 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 C17orf77Q96MU5 243 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 SLC50A1Q9BRV3 221 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 ZNF586Q9NXT0 402 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 UBQLN2Q9UHD9 624 aa10.17□□□□□ -0.78
VMP1-210ENST00000589823 TRBV19A0A075B6N1 114 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 SOCS3O14543 225 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 PRB2P02812 416 aaPredicted RBP10.16□□□□□ -0.78
VMP1-210ENST00000589823 FHITP49789 147 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 DEFB131AP59861 70 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 PDE6HQ13956 83 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 ODF3L2Q3SX64 289 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 PSMG4Q5JS54 123 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 ALKAL2Q6UX46 152 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 SSX7Q7RTT5 188 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 IQCF2Q8IXL9 164 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 FAM24BQ8N5W8 94 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 FXYD5Q96DB9 178 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 ZNF503Q96F45 646 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 LINC00052Q96N35 136 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 FAM110AQ9BQ89 295 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 MAP6D1Q9H9H5 199 aa10.16□□□□□ -0.78
VMP1-210ENST00000589823 SORL1Q92673 2214 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 MAP1LC3B2A6NCE7 125 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 ZNF253O75346 499 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 H2AFB1P0C5Y9 115 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 GCHFRP30047 84 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 PSG9Q00887 426 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 FAM74A1Q5RGS3 127 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 Q8N1Y9 231 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 SAT2Q96F10 170 aaPredicted RBP10.15□□□□□ -0.78
VMP1-210ENST00000589823 MAP1LC3BQ9GZQ8 125 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 ZNF331Q9NQX6 463 aaPredicted RBP10.15□□□□□ -0.78
VMP1-210ENST00000589823 TMEM167BQ9NRX6 74 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 CLEC5AQ9NY25 188 aa10.15□□□□□ -0.78
VMP1-210ENST00000589823 SLC17A3O00476 420 aa10.14□□□□□ -0.79
VMP1-210ENST00000589823 FGF8P55075 233 aaPredicted RBP10.14□□□□□ -0.79
VMP1-210ENST00000589823 DEFB125Q8N687 156 aa10.14□□□□□ -0.79
VMP1-210ENST00000589823 SFT2D1Q8WV19 159 aa10.14□□□□□ -0.79
VMP1-210ENST00000589823 MBD3L1Q8WWY6 194 aa10.14□□□□□ -0.79
VMP1-210ENST00000589823 AAMDCQ9H7C9 122 aa10.14□□□□□ -0.79
VMP1-210ENST00000589823 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
VMP1-210ENST00000589823 NOTCH1P46531 2555 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 TRAV8-2A0A0B4J237 113 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 ZNF705EA8MWA4 302 aaPredicted RBP10.13□□□□□ -0.79
VMP1-210ENST00000589823 TEX46H3BTG2 121 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 PSG3Q16557 428 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 IGFL4Q6B9Z1 124 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 LYPD1Q8N2G4 141 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 RNF182Q8N6D2 247 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 WFDC10AQ9H1F0 79 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 TUBA4BQ9H853 241 aa10.13□□□□□ -0.79
VMP1-210ENST00000589823 NBEAL1Q6ZS30 2694 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 NDUFB4O95168 129 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 HBE1P02100 147 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 RANP62826 216 aaKnown RBP10.12□□□□□ -0.79
VMP1-210ENST00000589823 DEFA6Q01524 100 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 ZNF738Q8NE65 137 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 C20orf173Q96LM9 149 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 SRD5A3Q9H8P0 318 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 PRELID1Q9Y255 219 aa10.12□□□□□ -0.79
VMP1-210ENST00000589823 A0A1B0GV50 99 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 K7EIL1 84 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 IFNA7P01567 189 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 IGHV4-30-4P0DP06 118 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 HLA-DMBP28068 263 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 BLOC1S1P78537 153 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 ZNF124Q15973 351 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 DEFB121Q5J5C9 76 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 TEX261Q6UWH6 196 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 STHQ8IWL8 128 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 EXOC3-AS1Q8N2X6 119 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 SUN5Q8TC36 379 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 MRAPQ8TCY5 172 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 MRPL53Q96EL3 112 aaKnown RBP10.11□□□□□ -0.79
VMP1-210ENST00000589823 Q9H3A6 140 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 TMPRSS5Q9H3S3 457 aa10.11□□□□□ -0.79
VMP1-210ENST00000589823 CSN1S1P47710 185 aa10.1□□□□□ -0.79
VMP1-210ENST00000589823 ICAM4Q14773 271 aa10.1□□□□□ -0.79
VMP1-210ENST00000589823 ACTL10Q5JWF8 245 aa10.1□□□□□ -0.79
VMP1-210ENST00000589823 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
VMP1-210ENST00000589823 RPUSD4Q96CM3 377 aaKnown RBP10.1□□□□□ -0.79
VMP1-210ENST00000589823 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
VMP1-210ENST00000589823 TRAV1-1A0A0B4J248 108 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms