RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 IGFL4Q6B9Z1 124 aa16.66■□□□□ 0.26
R3HDM4-205ENST00000589445 HMGB3O15347 200 aaKnown RBP16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 MBP02144 154 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 NKX2-5P52952 324 aaPredicted RBP16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 EIF5AP63241 154 aaKnown RBP16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 UBE2L3P68036 154 aaKnown RBP16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 C9orf62Q8N4C0 152 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 RNF182Q8N6D2 247 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 BLNKQ8WV28 456 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 FAM167A-AS1Q96KT0 104 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 C17orf77Q96MU5 243 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 CITED4Q96RK1 184 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 TMEM14CQ9P0S9 112 aa16.65■□□□□ 0.26
R3HDM4-205ENST00000589445 KNCNA6PVL3 124 aa16.64■□□□□ 0.25
R3HDM4-205ENST00000589445 H3BQ15 152 aa16.64■□□□□ 0.25
R3HDM4-205ENST00000589445 SLC17A3O00476 420 aa16.64■□□□□ 0.25
R3HDM4-205ENST00000589445 OR10J4P0C629 311 aa16.64■□□□□ 0.25
R3HDM4-205ENST00000589445 TPT1P13693 172 aaKnown RBP16.64■□□□□ 0.25
R3HDM4-205ENST00000589445 RPL35AP18077 110 aaKnown RBP16.64■□□□□ 0.25
R3HDM4-205ENST00000589445 PAXXQ9BUH6 204 aa16.64■□□□□ 0.25
R3HDM4-205ENST00000589445 SPP1P10451 314 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 ACTL10Q5JWF8 245 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 ZNF738Q8NE65 137 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 C20orf173Q96LM9 149 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 ASCL2Q99929 193 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 SLC50A1Q9BRV3 221 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 OR51M1Q9H341 326 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 HRH4Q9H3N8 390 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 ZNF586Q9NXT0 402 aa16.63■□□□□ 0.25
R3HDM4-205ENST00000589445 TRAV8-2A0A0B4J237 113 aa16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 RBMY1BA6NDE4 496 aaKnown RBP16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 RBMY1EA6NEQ0 496 aaKnown RBP16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 RBMY1DP0C7P1 496 aaKnown RBP16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 C4BPBP20851 252 aa16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 HLA-DMBP28068 263 aa16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 DEFB1P60022 68 aa16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 GUK1Q16774 197 aa16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 STHQ8IWL8 128 aa16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 RPRMQ9NS64 109 aa16.62■□□□□ 0.25
R3HDM4-205ENST00000589445 LOC102724200A0A096LPH7 203 aaPredicted RBP16.61■□□□□ 0.25
R3HDM4-205ENST00000589445 A8MZ25 164 aa16.61■□□□□ 0.25
R3HDM4-205ENST00000589445 HIST1H1EP10412 219 aaKnown RBP16.61■□□□□ 0.25
R3HDM4-205ENST00000589445 RPP25LQ8N5L8 163 aaKnown RBP16.61■□□□□ 0.25
R3HDM4-205ENST00000589445 B9D2Q9BPU9 175 aa16.61■□□□□ 0.25
R3HDM4-205ENST00000589445 ACTR3CQ9C0K3 210 aaPredicted RBP16.61■□□□□ 0.25
R3HDM4-205ENST00000589445 ARL14EPLP0DKL9 152 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 IQCF2Q8IXL9 164 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 BAP18Q8IXM2 172 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 STOML3Q8TAV4 291 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 RNF141Q8WVD5 230 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 TMED6Q8WW62 240 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 RAB24Q969Q5 203 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 FXYD5Q96DB9 178 aa16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 ZNF331Q9NQX6 463 aaPredicted RBP16.6■□□□□ 0.25
R3HDM4-205ENST00000589445 AGRNO00468 2067 aa16.59■□□□□ 0.25
R3HDM4-205ENST00000589445 TRBV19A0A075B6N1 114 aa16.59■□□□□ 0.25
R3HDM4-205ENST00000589445 PRB4P10163 310 aaPredicted RBP16.59■□□□□ 0.25
R3HDM4-205ENST00000589445 F6UB75 175 aa16.58■□□□□ 0.24
R3HDM4-205ENST00000589445 PQLC2Q6ZP29 291 aa16.58■□□□□ 0.24
R3HDM4-205ENST00000589445 SSX7Q7RTT5 188 aa16.58■□□□□ 0.24
R3HDM4-205ENST00000589445 SLC51BQ86UW2 128 aa16.58■□□□□ 0.24
R3HDM4-205ENST00000589445 ZNF503Q96F45 646 aa16.58■□□□□ 0.24
R3HDM4-205ENST00000589445 PHYHIPLQ96FC7 376 aa16.58■□□□□ 0.24
R3HDM4-205ENST00000589445 IGKV3-20P01619 116 aa16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 NBEAP1P0C6P0 100 aa16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 SEC11BP0C7V7 166 aa16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 APOC4P55056 127 aa16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 GDF5OSQ5U4N7 250 aa16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 EBLN2Q6P2I7 272 aa16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 FOXI2Q6ZQN5 318 aa16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 KMT2CQ8NEZ4 4911 aaKnown RBP16.57■□□□□ 0.24
R3HDM4-205ENST00000589445 CTXND1A0A1B0GTU2 59 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 ZNF253O75346 499 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 PDE6HQ13956 83 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 ZNF726P1Q15940 193 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 PSG3Q16557 428 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 HAGHQ16775 308 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 SBSPONQ8IVN8 264 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 FAM213BQ8TBF2 198 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 SAT2Q96F10 170 aaPredicted RBP16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 SAV1Q9H4B6 383 aaPredicted RBP16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 AAMDCQ9H7C9 122 aa16.56■□□□□ 0.24
R3HDM4-205ENST00000589445 NDUFB4O95168 129 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 STAG3L2P0CL84 134 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 STAG3L3P0CL85 134 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 HLA-DRB4P13762 266 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 PSG9Q00887 426 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 TRPT1Q86TN4 253 aaKnown RBP16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 EXOC3-AS1Q8N2X6 119 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 OR4B1Q8NGF8 309 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 RPUSD4Q96CM3 377 aaKnown RBP16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 HLA-DRB4X5D2U9 266 aa16.55■□□□□ 0.24
R3HDM4-205ENST00000589445 MAP1LC3B2A6NCE7 125 aa16.54■□□□□ 0.24
R3HDM4-205ENST00000589445 UMAD1C9J7I0 102 aa16.54■□□□□ 0.24
R3HDM4-205ENST00000589445 BOLA2-SMG1P6H3BVE0 249 aa16.54■□□□□ 0.24
R3HDM4-205ENST00000589445 CXorf1O96002 111 aa16.54■□□□□ 0.24
R3HDM4-205ENST00000589445 GCHFRP30047 84 aa16.54■□□□□ 0.24
R3HDM4-205ENST00000589445 EIF5AL1Q6IS14 154 aaKnown RBP16.54■□□□□ 0.24
R3HDM4-205ENST00000589445 LINC00322Q6ZN03 302 aaPredicted RBP16.54■□□□□ 0.24
R3HDM4-205ENST00000589445 MAP1LC3BQ9GZQ8 125 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms