RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 NBEAP1P0C6P0 100 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
DNMT1-218ENST00000589294 PDE6HQ13956 83 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 ZNF726P1Q15940 193 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 LCN15Q6UWW0 184 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 SUN5Q8TC36 379 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 LRRC20Q8TCA0 184 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 MBD3L1Q8WWY6 194 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 FXYD5Q96DB9 178 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 SAT2Q96F10 170 aaPredicted RBP9.09□□□□□ -0.95
DNMT1-218ENST00000589294 ZNF503Q96F45 646 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 C16orf92Q96LL3 132 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 ZNF586Q9NXT0 402 aa9.09□□□□□ -0.95
DNMT1-218ENST00000589294 SOCS3O14543 225 aa9.08□□□□□ -0.96
DNMT1-218ENST00000589294 PYYP10082 97 aa9.08□□□□□ -0.96
DNMT1-218ENST00000589294 PSMB3P49720 205 aa9.08□□□□□ -0.96
DNMT1-218ENST00000589294 PSG9Q00887 426 aa9.08□□□□□ -0.96
DNMT1-218ENST00000589294 Q8N1Y9 231 aa9.08□□□□□ -0.96
DNMT1-218ENST00000589294 FAM213BQ8TBF2 198 aa9.08□□□□□ -0.96
DNMT1-218ENST00000589294 SLC50A1Q9BRV3 221 aa9.08□□□□□ -0.96
DNMT1-218ENST00000589294 OR11H12B2RN74 326 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 HMGB3O15347 200 aaKnown RBP9.07□□□□□ -0.96
DNMT1-218ENST00000589294 CD7P09564 240 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 H2AFB1P0C5Y9 115 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 OR10J4P0C629 311 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 ARL14EPLP0DKL9 152 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 FHITP49789 147 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 CD81P60033 236 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 TEX261Q6UWH6 196 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 LYPD1Q8N2G4 141 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 SFT2D1Q8WV19 159 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 PRR25Q96S07 402 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 ZNF331Q9NQX6 463 aaPredicted RBP9.07□□□□□ -0.96
DNMT1-218ENST00000589294 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 C19orf73Q9NVV2 129 aa9.07□□□□□ -0.96
DNMT1-218ENST00000589294 TRAV8-2A0A0B4J237 113 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 TRAV1-1A0A0B4J248 108 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 MAP1LC3B2A6NCE7 125 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 EIF3GO75821 320 aaKnown RBP eCLIP9.06□□□□□ -0.96
DNMT1-218ENST00000589294 NDUFB4O95168 129 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 ZNF688P0C7X2 276 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 GCHFRP30047 84 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 UBE2L3P68036 154 aaKnown RBP9.06□□□□□ -0.96
DNMT1-218ENST00000589294 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 ALKAL2Q6UX46 152 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 SSX7Q7RTT5 188 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 FAM24BQ8N5W8 94 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 BLNKQ8WV28 456 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 MAP1LC3BQ9GZQ8 125 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 PRELID1Q9Y255 219 aa9.06□□□□□ -0.96
DNMT1-218ENST00000589294 TEX46H3BTG2 121 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 IFNA7P01567 189 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
DNMT1-218ENST00000589294 DEFB131AP59861 70 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 BLOC1S1P78537 153 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 PSG3Q16557 428 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 PSMG4Q5JS54 123 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 ZNF680Q8NEM1 530 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 LINC00052Q96N35 136 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 MAP6D1Q9H9H5 199 aa9.05□□□□□ -0.96
DNMT1-218ENST00000589294 AURKAIP1Q9NWT8 199 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-218ENST00000589294 ZNF705EA8MWA4 302 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-218ENST00000589294 A8MZ25 164 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 H3BTX0 84 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 SLC17A3O00476 420 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 HBE1P02100 147 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 FGF8P55075 233 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-218ENST00000589294 RANP62826 216 aaKnown RBP9.04□□□□□ -0.96
DNMT1-218ENST00000589294 FAM74A1Q5RGS3 127 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 MRPL53Q96EL3 112 aaKnown RBP9.04□□□□□ -0.96
DNMT1-218ENST00000589294 AAMDCQ9H7C9 122 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 UBQLN2Q9UHD9 624 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 MEGF8Q7Z7M0 2845 aa9.04□□□□□ -0.96
DNMT1-218ENST00000589294 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 PPT1P50897 306 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 PMS2P11Q13670 270 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 IGFL4Q6B9Z1 124 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 DEFB125Q8N687 156 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 ARL6IP6Q8N6S5 226 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 C20orf173Q96LM9 149 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 NKX6-2Q9C056 277 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-218ENST00000589294 TMPRSS5Q9H3S3 457 aa9.03□□□□□ -0.96
DNMT1-218ENST00000589294 ICAM4Q14773 271 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 EBLN2Q6P2I7 272 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 APRG1Q8IVJ8 170 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 IQCF2Q8IXL9 164 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 EXOC3-AS1Q8N2X6 119 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 RNF182Q8N6D2 247 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 RXFP4Q8TDU9 374 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 RPUSD4Q96CM3 377 aaKnown RBP9.02□□□□□ -0.97
DNMT1-218ENST00000589294 Q9H3A6 140 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 SAV1Q9H4B6 383 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-218ENST00000589294 TUBA4BQ9H853 241 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 ARL2-SNX15V9GYD0 113 aa9.02□□□□□ -0.97
DNMT1-218ENST00000589294 PGPA6NDG6 321 aa9.01□□□□□ -0.97
DNMT1-218ENST00000589294 K7EIL1 84 aa9.01□□□□□ -0.97
DNMT1-218ENST00000589294 PRB2P02812 416 aaPredicted RBP9.01□□□□□ -0.97
DNMT1-218ENST00000589294 IGHV4-30-4P0DP06 118 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms