RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 OR11H6Q8NGC7 330 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 PIFOQ8TCI5 191 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 AKR1E2Q96JD6 320 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TSNAXQ99598 290 aaKnown RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ASCL2Q99929 193 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ALKBH7Q9BT30 221 aaPredicted RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 DNAJC4Q9NNZ3 241 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 PEF1Q9UBV8 284 aaKnown RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 WDR83OSQ9Y284 106 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ZFP92A6NM28 416 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 K7EQM0 130 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TRBV12-3P01733 135 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 GIPP09681 153 aaPredicted RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 VPREB1P12018 145 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 HLA-GP17693 338 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 MDKP21741 143 aaPredicted RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 RND2P52198 227 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TPPP2P59282 170 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF90Q03938 601 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 GAMTQ14353 236 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 LRRC75BQ2VPJ9 315 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 Q56UQ5 140 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 NMSQ5H8A3 153 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 CLEC19AQ6UXS0 136 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 C15orf54Q8N8G6 183 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 Q8N9W7 124 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 MALSU1Q96EH3 234 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 GALNT14Q96FL9 552 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 SGK494Q96LW2 274 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 P2RX4Q99571 388 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 RNF126Q9BV68 326 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 MMP24Q9Y5R2 645 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 URGCP-MRPS24S4R325 110 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TRAV26-1A0A087WT03 109 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 IGHV7-81A0A0B4J1V7 117 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TRAV25A0A0B4J276 109 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 A0A1B0GU03 582 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 SNRPGP15A8MWD9 76 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 A8MWP6 167 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ODF3BA8MYP8 253 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 IGLV2-23P01705 113 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TRGV3P03979 118 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 IL5P05113 134 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 OR5G3P0C626 314 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 FAM157CP0CG43 387 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 NPY1RP25929 384 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 RAB11AP62491 216 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 PRSS8Q16651 343 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 KIAA1644Q3SXP7 199 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ADAMTSL4-AS1Q5T5F5 129 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM182Q6ZP80 229 aaPredicted RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 Q6ZRP5 223 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 Q6ZS49 121 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM252Q8N6L7 170 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 ARPC1AQ92747 370 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 OR4C12Q96R67 309 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 SNHG12Q9BXW3 62 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 VSIRQ9H7M9 311 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 RAB18Q9NP72 206 aa2.51□□□□□ -2.01
ZNF540-207ENST00000589285 FOXA2Q9Y261 457 aaPredicted RBP2.51□□□□□ -2.01
ZNF540-207ENST00000589285 KANTRA0A1W2PQU2 76 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 RNF222A6NCQ9 220 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 C15orf61A6NNL5 157 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 UPK2O00526 184 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 SIVA1O15304 175 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 CD5LO43866 347 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 MT-CO2P00403 227 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 OR10J4P0C629 311 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 IER3P46695 156 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 NPBWR1P48145 328 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 PPT1P50897 306 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 MFAP2P55001 183 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 HSPE1P61604 102 aaKnown RBP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 UBA52P62987 128 aaKnown RBP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 RHOGP84095 191 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 EWSR1Q01844 656 aaKnown RBP eCLIP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 OR5I1Q13606 314 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 PEA15Q15121 130 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 HAGHQ16775 308 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 C15orf32Q32M92 178 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 MIC13Q5XKP0 118 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 LCN15Q6UWW0 184 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 PDPNQ86YL7 162 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 C8orf46Q8TAG6 207 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 ZNF418Q8TF45 676 aaPredicted RBP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 SPIN2AQ99865 258 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 SPIN2BQ9BPZ2 258 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 FNDC4Q9H6D8 234 aaPredicted RBP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 TMEM231Q9H6L2 316 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 SMPXQ9UHP9 88 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 TRBV7-9A0A0J9YWB2 115 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 LY6LH3BQJ8 138 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 SNAI2O43623 268 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 PRB2P02812 416 aaPredicted RBP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 PAX9P55771 341 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 DEFB1P60022 68 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 LYZP61626 148 aa2.5□□□□□ -2.01
ZNF540-207ENST00000589285 RPL23AP62750 156 aaKnown RBP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 ERHP84090 104 aaKnown RBP2.5□□□□□ -2.01
ZNF540-207ENST00000589285 BSXQ3C1V8 233 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms