RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 C9orf139Q6ZV77 190 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 EXOC3-AS1Q8N2X6 119 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 NHLRC2Q8NBF2 726 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 WFDC11Q8NEX6 87 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 CMTM2Q8TAZ6 248 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 ZNF414Q96IQ9 312 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 ATG101Q9BSB4 218 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 VPS13CQ709C8 3753 aa6.79□□□□□ -1.32
SMAD4-206ENST00000588860 A0A1W2PPQ1 181 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 SLC17A3O00476 420 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 GGCTO75223 188 aaKnown RBP6.78□□□□□ -1.32
SMAD4-206ENST00000588860 GCGP01275 180 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 TCRAP04437 139 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 S100A9P06702 114 aaKnown RBP6.78□□□□□ -1.32
SMAD4-206ENST00000588860 RPL7P18124 248 aaKnown RBP6.78□□□□□ -1.32
SMAD4-206ENST00000588860 ARL3P36405 182 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 RPL15P61313 204 aaKnown RBP6.78□□□□□ -1.32
SMAD4-206ENST00000588860 TMEM95Q3KNT9 176 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 Q6YL49 198 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 OR8I2Q8N0Y5 310 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 TMEM190Q8WZ59 177 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 FMC1Q96HJ9 113 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 C17orf77Q96MU5 243 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 IMMP2LQ96T52 175 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 PYGO2Q9BRQ0 406 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 SAV1Q9H4B6 383 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-206ENST00000588860 BIN3Q9NQY0 253 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 VPREB3Q9UKI3 123 aa6.78□□□□□ -1.32
SMAD4-206ENST00000588860 ZNF207O43670 478 aaKnown RBP6.77□□□□□ -1.33
SMAD4-206ENST00000588860 BRI3O95415 125 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 IGHV3-11P01762 117 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 PPIFP30405 207 aaKnown RBP6.77□□□□□ -1.33
SMAD4-206ENST00000588860 FAM3BP58499 235 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-206ENST00000588860 RPEL1Q2QD12 228 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 SIGLEC15Q6ZMC9 328 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 GOLT1AQ6ZVE7 132 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 LYPD1Q8N2G4 141 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 CIARTQ8N365 385 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-206ENST00000588860 USMG5Q96IX5 58 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 SGK494Q96LW2 274 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 METTL26Q96S19 204 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 ATP6V0BQ99437 205 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 RNASE7Q9H1E1 156 aaKnown RBP6.77□□□□□ -1.33
SMAD4-206ENST00000588860 OSTCQ9NRP0 149 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 IL36BQ9NZH7 164 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF580Q9UK33 172 aa6.77□□□□□ -1.33
SMAD4-206ENST00000588860 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF320A2RRD8 509 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 HOXA3O43365 443 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-206ENST00000588860 IGLV1-40P01703 118 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 TRGC2P03986 189 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 S100A6P06703 90 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 FOSL1P15407 271 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 RAB9AP51151 201 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 PSG9Q00887 426 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 CFHR3Q02985 330 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 PDE6HQ13956 83 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 IBA57Q5T440 356 aaKnown RBP6.76□□□□□ -1.33
SMAD4-206ENST00000588860 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 Q71RC1 249 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-206ENST00000588860 Q86TA4 180 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 BTF3L4Q96K17 158 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 PRSS22Q9GZN4 317 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 KLK15Q9H2R5 256 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 AAMDCQ9H7C9 122 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 SRD5A3Q9H8P0 318 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 SERTAD4Q9NUC0 356 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 KLF12Q9Y4X4 402 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 V9GYV3 84 aa6.76□□□□□ -1.33
SMAD4-206ENST00000588860 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-206ENST00000588860 IGHV3-49A0A0A0MS15 119 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 IGHV3-66A0A0C4DH42 116 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 A0A0G2JLM5 398 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 CLPSL1A2RUU4 121 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF785A8K8V0 405 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 ZNF705GA8MUZ8 300 aaPredicted RBP6.75□□□□□ -1.33
SMAD4-206ENST00000588860 DIRC3C9JPN6 131 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 K7EQM0 130 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
SMAD4-206ENST00000588860 LTAP01374 205 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 TRBV12-3P01733 135 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 TYMSP04818 313 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 CSN1S1P47710 185 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 FOXL1Q12952 345 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 PRR27Q6MZM9 219 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 PRNTQ86SH4 94 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 TEX29Q8N6K0 151 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 SIGLECL1Q8N7X8 197 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 OR4X2Q8NGF9 303 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 SMIM12Q96EX1 92 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 GPR82Q96P67 336 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 FOXC2Q99958 501 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 NPFFR1Q9GZQ6 430 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 SMAD5-AS1Q9Y6J3 95 aa6.75□□□□□ -1.33
SMAD4-206ENST00000588860 TRAV9-1A0A075B6T8 112 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms