RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 F6UZH7 168 aa16.96■□□□□ 0.31
ATG4D-209ENST00000588857 CCL24O00175 119 aa16.96■□□□□ 0.31
ATG4D-209ENST00000588857 NDUFS6O75380 124 aaKnown RBP16.96■□□□□ 0.31
ATG4D-209ENST00000588857 SUMO1P63165 101 aaKnown RBP16.96■□□□□ 0.31
ATG4D-209ENST00000588857 CYB561D1Q8N8Q1 229 aa16.96■□□□□ 0.31
ATG4D-209ENST00000588857 RHPN1-AS1Q9BWJ2 59 aa16.96■□□□□ 0.31
ATG4D-209ENST00000588857 ANK2Q01484 3957 aa16.96■□□□□ 0.31
ATG4D-209ENST00000588857 TMEM213A2RRL7 107 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 GGTLC3B5MD39 225 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 F8W036 122 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 TMEM250H0YL14 139 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 KRTAP10-3P60369 221 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 SIGLEC15Q6ZMC9 328 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 ELOVL1Q9BW60 279 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 SMAD5-AS1Q9Y6J3 95 aa16.95■□□□□ 0.3
ATG4D-209ENST00000588857 CHEK1O14757 476 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 PDE6HQ13956 83 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 SOHLH1Q5JUK2 328 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 C12orf54Q6X4T0 127 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 NDUFA11Q86Y39 141 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 GLMPQ8WWB7 406 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 C17orf77Q96MU5 243 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 NSUN5P1Q3KNT7 163 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 CCDC28AQ8IWP9 274 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 SEC11CQ9BY50 192 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 Q9H3A6 140 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 PEMTQ9UBM1 199 aa16.94■□□□□ 0.3
ATG4D-209ENST00000588857 A0A087X0K7 114 aa16.93■□□□□ 0.3
ATG4D-209ENST00000588857 PGPA6NDG6 321 aa16.93■□□□□ 0.3
ATG4D-209ENST00000588857 NDUFB4O95168 129 aa16.93■□□□□ 0.3
ATG4D-209ENST00000588857 PSG9Q00887 426 aa16.93■□□□□ 0.3
ATG4D-209ENST00000588857 FHL3Q13643 280 aa16.93■□□□□ 0.3
ATG4D-209ENST00000588857 LYPD1Q8N2G4 141 aa16.93■□□□□ 0.3
ATG4D-209ENST00000588857 WNK1Q9H4A3 2382 aa16.92■□□□□ 0.3
ATG4D-209ENST00000588857 HELTA6NFD8 242 aa16.92■□□□□ 0.3
ATG4D-209ENST00000588857 C2orf70A6NJV1 201 aa16.92■□□□□ 0.3
ATG4D-209ENST00000588857 M0QZ24 198 aa16.92■□□□□ 0.3
ATG4D-209ENST00000588857 MEOX2P50222 304 aa16.92■□□□□ 0.3
ATG4D-209ENST00000588857 DLX4Q92988 240 aaPredicted RBP16.92■□□□□ 0.3
ATG4D-209ENST00000588857 OTORQ9NRC9 128 aa16.92■□□□□ 0.3
ATG4D-209ENST00000588857 ADARB2-AS1A8MUL3 147 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 SLC17A3O00476 420 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 ADCYAP1P18509 176 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 EDN2P20800 178 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 CBLN1P23435 193 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 MYCNOSP40205 109 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 RPL11P62913 178 aaKnown RBP16.91■□□□□ 0.3
ATG4D-209ENST00000588857 AWAT1Q58HT5 328 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 OR9G4Q8NGQ1 327 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 TCEAL7Q9BRU2 100 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 AAMDCQ9H7C9 122 aa16.91■□□□□ 0.3
ATG4D-209ENST00000588857 SCO2A0A1W2PP80 73 aa16.9■□□□□ 0.3
ATG4D-209ENST00000588857 SLC25A5P05141 298 aaKnown RBP16.9■□□□□ 0.3
ATG4D-209ENST00000588857 RPUSD4Q96CM3 377 aaKnown RBP16.9■□□□□ 0.3
ATG4D-209ENST00000588857 ZNF253O75346 499 aa16.89■□□□□ 0.3
ATG4D-209ENST00000588857 FOLR2P14207 255 aa16.89■□□□□ 0.3
ATG4D-209ENST00000588857 FAM90A2PQ658T7 463 aa16.89■□□□□ 0.3
ATG4D-209ENST00000588857 EXOC3-AS1Q8N2X6 119 aa16.89■□□□□ 0.3
ATG4D-209ENST00000588857 CMTM2Q8TAZ6 248 aa16.89■□□□□ 0.3
ATG4D-209ENST00000588857 APOC3P02656 99 aa16.89■□□□□ 0.29
ATG4D-209ENST00000588857 ZNF674Q2M3X9 581 aa16.89■□□□□ 0.29
ATG4D-209ENST00000588857 C10orf91Q5T1B1 145 aa16.89■□□□□ 0.29
ATG4D-209ENST00000588857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.89■□□□□ 0.29
ATG4D-209ENST00000588857 C5orf17Q8NAS9 161 aa16.89■□□□□ 0.29
ATG4D-209ENST00000588857 C11orf52Q96A22 123 aa16.89■□□□□ 0.29
ATG4D-209ENST00000588857 CARHSP1Q9Y2V2 147 aaKnown RBP16.89■□□□□ 0.29
ATG4D-209ENST00000588857 TENM1Q9UKZ4 2725 aa16.89■□□□□ 0.29
ATG4D-209ENST00000588857 TCF24Q7RTU0 167 aa16.88■□□□□ 0.29
ATG4D-209ENST00000588857 SLC50A1Q9BRV3 221 aa16.88■□□□□ 0.29
ATG4D-209ENST00000588857 ZNF727A8MUV8 499 aa16.87■□□□□ 0.29
ATG4D-209ENST00000588857 FAM74A3Q4VXF1 159 aa16.87■□□□□ 0.29
ATG4D-209ENST00000588857 HIST1H2BAQ96A08 127 aa16.87■□□□□ 0.29
ATG4D-209ENST00000588857 SMIM7Q9BQ49 75 aa16.87■□□□□ 0.29
ATG4D-209ENST00000588857 PARLQ9H300 379 aa16.87■□□□□ 0.29
ATG4D-209ENST00000588857 ZNF331Q9NQX6 463 aaPredicted RBP16.87■□□□□ 0.29
ATG4D-209ENST00000588857 EPDR1Q9UM22 224 aa16.87■□□□□ 0.29
ATG4D-209ENST00000588857 C3orf56Q8N813 242 aa16.86■□□□□ 0.29
ATG4D-209ENST00000588857 RPH3ALQ9UNE2 315 aa16.86■□□□□ 0.29
ATG4D-209ENST00000588857 PEX7O00628 323 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 OVOL1O14753 267 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 GNG5P63218 68 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 NIPSNAP3BQ9BS92 247 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 NRN1Q9NPD7 142 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 SELENOKQ9Y6D0 94 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 C16orf92Q96LL3 132 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 CITED1Q99966 193 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 ATG101Q9BSB4 218 aa16.85■□□□□ 0.29
ATG4D-209ENST00000588857 IGKV3-7A0A075B6H7 116 aa16.84■□□□□ 0.29
ATG4D-209ENST00000588857 CSN3P07498 182 aa16.84■□□□□ 0.29
ATG4D-209ENST00000588857 AKR1C3P42330 323 aa16.84■□□□□ 0.29
ATG4D-209ENST00000588857 CSN1S1P47710 185 aa16.84■□□□□ 0.29
ATG4D-209ENST00000588857 DERL1Q9BUN8 251 aa16.84■□□□□ 0.29
ATG4D-209ENST00000588857 MLXQ9UH92 298 aa16.84■□□□□ 0.29
ATG4D-209ENST00000588857 TCRAP04437 139 aa16.83■□□□□ 0.28
ATG4D-209ENST00000588857 CNN1P51911 297 aaKnown RBP16.83■□□□□ 0.28
ATG4D-209ENST00000588857 GUCA2BQ16661 112 aa16.83■□□□□ 0.28
ATG4D-209ENST00000588857 ADAMTSL5Q6ZMM2 481 aa16.83■□□□□ 0.28
ATG4D-209ENST00000588857 SVBPQ8N300 66 aa16.83■□□□□ 0.28
ATG4D-209ENST00000588857 C2CD4CQ8TF44 421 aa16.83■□□□□ 0.28
ATG4D-209ENST00000588857 RPL35P42766 123 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms