RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 FRMD6-AS1P0C7T7 363 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 ID1P41134 155 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 TMEM41BQ5BJD5 291 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 SAMD13Q5VXD3 122 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 HRH4Q9H3N8 390 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 RPRMQ9NS64 109 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 ZNF586Q9NXT0 402 aa14.06□□□□□ -0.16
CLPTM1-209ENST00000588855 SLC17A3O00476 420 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 OR7C2O60412 319 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 CDC34P49427 236 aaPredicted RBP14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 KHDC3LQ587J8 217 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 LCN15Q6UWW0 184 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 STOML3Q8TAV4 291 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 C20orf173Q96LM9 149 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 LINC00052Q96N35 136 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 AGRNO00468 2067 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 HIST1H1EP10412 219 aaKnown RBP14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 TPT1P13693 172 aaKnown RBP14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 TAS2R45P59539 299 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 EIF5AP63241 154 aaKnown RBP14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 AKR1C8PQ5T2L2 129 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 BAP18Q8IXM2 172 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 RNF182Q8N6D2 247 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 ZNF503Q96F45 646 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 PAXXQ9BUH6 204 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 OR51M1Q9H341 326 aa14.05□□□□□ -0.16
CLPTM1-209ENST00000588855 RBMY1BA6NDE4 496 aaKnown RBP14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 RBMY1EA6NEQ0 496 aaKnown RBP14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 HMGB3O15347 200 aaKnown RBP14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 OR10J4P0C629 311 aa14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 RBMY1DP0C7P1 496 aaKnown RBP14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 HLA-DMBP28068 263 aa14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 DEFB1P60022 68 aa14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 SSX7Q7RTT5 188 aa14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 FXYD5Q96DB9 178 aa14.04□□□□□ -0.16
CLPTM1-209ENST00000588855 KNCNA6PVL3 124 aa14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 SEC11BP0C7V7 166 aa14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 GUK1Q16774 197 aa14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 BLNKQ8WV28 456 aa14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 RAB24Q969Q5 203 aa14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 SAT2Q96F10 170 aaPredicted RBP14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 SLC50A1Q9BRV3 221 aa14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 ZNF331Q9NQX6 463 aaPredicted RBP14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 PLA2G2EQ9NZK7 142 aa14.03□□□□□ -0.16
CLPTM1-209ENST00000588855 TRBV19A0A075B6N1 114 aa14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 UBE2L3P68036 154 aaKnown RBP14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 ZNF726P1Q15940 193 aa14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 LINC00322Q6ZN03 302 aaPredicted RBP14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 SLC51BQ86UW2 128 aa14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 RNF141Q8WVD5 230 aa14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 TMED6Q8WW62 240 aa14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 ACTR3CQ9C0K3 210 aaPredicted RBP14.02□□□□□ -0.16
CLPTM1-209ENST00000588855 COL7A1Q02388 2944 aa14.01□□□□□ -0.17
CLPTM1-209ENST00000588855 STAG3L2P0CL84 134 aa14.01□□□□□ -0.17
CLPTM1-209ENST00000588855 STAG3L3P0CL85 134 aa14.01□□□□□ -0.17
CLPTM1-209ENST00000588855 ACTL10Q5JWF8 245 aa14.01□□□□□ -0.17
CLPTM1-209ENST00000588855 NDUFB4O95168 129 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 NBEAP1P0C6P0 100 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 ARL14EPLP0DKL9 152 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 RPL35AP18077 110 aaKnown RBP14□□□□□ -0.17
CLPTM1-209ENST00000588855 C4BPBP20851 252 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 GDF5OSQ5U4N7 250 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 PQLC2Q6ZP29 291 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 B9D2Q9BPU9 175 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 LOC102724200A0A096LPH7 203 aaPredicted RBP14□□□□□ -0.17
CLPTM1-209ENST00000588855 F6UB75 175 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 ZNF253O75346 499 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 PRB4P10163 310 aaPredicted RBP14□□□□□ -0.17
CLPTM1-209ENST00000588855 PDE6HQ13956 83 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 STHQ8IWL8 128 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 ZNF738Q8NE65 137 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 PHYHIPLQ96FC7 376 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 ASCL2Q99929 193 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
CLPTM1-209ENST00000588855 HUWE1Q7Z6Z7 4374 aaKnown RBP13.99□□□□□ -0.17
CLPTM1-209ENST00000588855 CTXND1A0A1B0GTU2 59 aa13.99□□□□□ -0.17
CLPTM1-209ENST00000588855 FHITP49789 147 aa13.99□□□□□ -0.17
CLPTM1-209ENST00000588855 PSG3Q16557 428 aa13.99□□□□□ -0.17
CLPTM1-209ENST00000588855 SBSPONQ8IVN8 264 aa13.99□□□□□ -0.17
CLPTM1-209ENST00000588855 SAV1Q9H4B6 383 aaPredicted RBP13.99□□□□□ -0.17
CLPTM1-209ENST00000588855 BOLA2-SMG1P6H3BVE0 249 aa13.98□□□□□ -0.17
CLPTM1-209ENST00000588855 HAGHQ16775 308 aa13.98□□□□□ -0.17
CLPTM1-209ENST00000588855 FOXI2Q6ZQN5 318 aa13.98□□□□□ -0.17
CLPTM1-209ENST00000588855 TRPT1Q86TN4 253 aaKnown RBP13.98□□□□□ -0.17
CLPTM1-209ENST00000588855 ZNF705FA8MVS1 300 aaPredicted RBP13.97□□□□□ -0.17
CLPTM1-209ENST00000588855 UMAD1C9J7I0 102 aa13.97□□□□□ -0.17
CLPTM1-209ENST00000588855 HLA-DRB4P13762 266 aa13.97□□□□□ -0.17
CLPTM1-209ENST00000588855 PSG9Q00887 426 aa13.97□□□□□ -0.17
CLPTM1-209ENST00000588855 EXOC3-AS1Q8N2X6 119 aa13.97□□□□□ -0.17
CLPTM1-209ENST00000588855 HLA-DRB4X5D2U9 266 aa13.97□□□□□ -0.17
CLPTM1-209ENST00000588855 NBEAL2Q6ZNJ1 2754 aa13.97□□□□□ -0.17
CLPTM1-209ENST00000588855 TGP01266 2768 aa13.96□□□□□ -0.17
CLPTM1-209ENST00000588855 A0A0J9YX75 114 aa13.96□□□□□ -0.17
CLPTM1-209ENST00000588855 H3BMM0 161 aa13.96□□□□□ -0.17
CLPTM1-209ENST00000588855 CXorf1O96002 111 aa13.96□□□□□ -0.17
CLPTM1-209ENST00000588855 GCHFRP30047 84 aa13.96□□□□□ -0.17
CLPTM1-209ENST00000588855 FAM213BQ8TBF2 198 aa13.96□□□□□ -0.17
CLPTM1-209ENST00000588855 MAP1LC3B2A6NCE7 125 aa13.95□□□□□ -0.18
CLPTM1-209ENST00000588855 M0R3E3 92 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms