RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 RPRMQ9NS64 109 aa11.5□□□□□ -0.57
GHDC-209ENST00000588762 OR7C2O60412 319 aa11.49□□□□□ -0.57
GHDC-209ENST00000588762 SNRPCP09234 159 aaKnown RBP11.49□□□□□ -0.57
GHDC-209ENST00000588762 KHDC3LQ587J8 217 aa11.49□□□□□ -0.57
GHDC-209ENST00000588762 FAM122CQ6P4D5 195 aa11.49□□□□□ -0.57
GHDC-209ENST00000588762 LINC00322Q6ZN03 302 aaPredicted RBP11.49□□□□□ -0.57
GHDC-209ENST00000588762 FAM167A-AS1Q96KT0 104 aa11.49□□□□□ -0.57
GHDC-209ENST00000588762 ASCL2Q99929 193 aa11.49□□□□□ -0.57
GHDC-209ENST00000588762 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
GHDC-209ENST00000588762 OR51M1Q9H341 326 aa11.49□□□□□ -0.57
GHDC-209ENST00000588762 KNCNA6PVL3 124 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 H3BQ15 152 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 PYYP10082 97 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
GHDC-209ENST00000588762 RPL35AP18077 110 aaKnown RBP11.48□□□□□ -0.57
GHDC-209ENST00000588762 APOC4P55056 127 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 CD300CQ08708 224 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 HAGHQ16775 308 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 ACTL10Q5JWF8 245 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 SBSPONQ8IVN8 264 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 PAXXQ9BUH6 204 aa11.48□□□□□ -0.57
GHDC-209ENST00000588762 TRAV8-2A0A0B4J237 113 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 H3BTX0 84 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
GHDC-209ENST00000588762 C4BPBP20851 252 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 CDC34P49427 236 aaPredicted RBP11.47□□□□□ -0.57
GHDC-209ENST00000588762 LGALSLQ3ZCW2 172 aaPredicted RBP11.47□□□□□ -0.57
GHDC-209ENST00000588762 AKR1C8PQ5T2L2 129 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 RNF182Q8N6D2 247 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 RNF141Q8WVD5 230 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
GHDC-209ENST00000588762 ZNF586Q9NXT0 402 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
GHDC-209ENST00000588762 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 KIR2DL5BA0A0G2JN68 375 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 KIR2DL5BA0A0G2JPC4 375 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 ZNF253O75346 499 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 NBEAP1P0C6P0 100 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 SPP1P10451 314 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 PSG3Q16557 428 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 EBLN2Q6P2I7 272 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 FOXI2Q6ZQN5 318 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 KIR2DL5AQ8N109 375 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 RPP25LQ8N5L8 163 aaKnown RBP11.46□□□□□ -0.57
GHDC-209ENST00000588762 ZNF738Q8NE65 137 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 KIR2DL5BQ8NHK3 375 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 C20orf173Q96LM9 149 aa11.46□□□□□ -0.57
GHDC-209ENST00000588762 ACTR3CQ9C0K3 210 aaPredicted RBP11.46□□□□□ -0.57
GHDC-209ENST00000588762 TGP01266 2768 aa11.46□□□□□ -0.58
GHDC-209ENST00000588762 PRKDCP78527 4128 aaKnown RBP11.46□□□□□ -0.58
GHDC-209ENST00000588762 SLC17A3O00476 420 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 UBE2CO00762 179 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 OR10J4P0C629 311 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 TPT1P13693 172 aaKnown RBP11.45□□□□□ -0.58
GHDC-209ENST00000588762 UBE2L3P68036 154 aaKnown RBP11.45□□□□□ -0.58
GHDC-209ENST00000588762 PSG9Q00887 426 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 PDE6HQ13956 83 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 PQLC2Q6ZP29 291 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 TRPT1Q86TN4 253 aaKnown RBP11.45□□□□□ -0.58
GHDC-209ENST00000588762 BAP18Q8IXM2 172 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 RAB24Q969Q5 203 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
GHDC-209ENST00000588762 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
GHDC-209ENST00000588762 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 COL7A1Q02388 2944 aa11.45□□□□□ -0.58
GHDC-209ENST00000588762 SEC11BP0C7V7 166 aa11.44□□□□□ -0.58
GHDC-209ENST00000588762 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
GHDC-209ENST00000588762 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
GHDC-209ENST00000588762 FXYD5Q96DB9 178 aa11.44□□□□□ -0.58
GHDC-209ENST00000588762 CSTL1Q9H114 145 aa11.44□□□□□ -0.58
GHDC-209ENST00000588762 AAMDCQ9H7C9 122 aa11.44□□□□□ -0.58
GHDC-209ENST00000588762 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
GHDC-209ENST00000588762 A0A0J9YX75 114 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 H3BMM0 161 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
GHDC-209ENST00000588762 EIF3GO75821 320 aaKnown RBP eCLIP11.43□□□□□ -0.58
GHDC-209ENST00000588762 DEFB1P60022 68 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 NUTF2P61970 127 aaKnown RBP11.43□□□□□ -0.58
GHDC-209ENST00000588762 MORN3Q6PF18 240 aaPredicted RBP11.43□□□□□ -0.58
GHDC-209ENST00000588762 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 STOML3Q8TAV4 291 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 RPUSD4Q96CM3 377 aaKnown RBP11.43□□□□□ -0.58
GHDC-209ENST00000588762 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 SPATA25Q9BR10 227 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 TM2D3Q9BRN9 247 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 PRELID1Q9Y255 219 aa11.43□□□□□ -0.58
GHDC-209ENST00000588762 UMAD1C9J7I0 102 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 F6UB75 175 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 DUSP14O95147 198 aaKnown RBP11.42□□□□□ -0.58
GHDC-209ENST00000588762 NDUFB4O95168 129 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 IGKV3-20P01619 116 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 ARL14EPLP0DKL9 152 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 GDF5OSQ5U4N7 250 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 EIF5AL1Q6IS14 154 aaKnown RBP11.42□□□□□ -0.58
GHDC-209ENST00000588762 SLC51BQ86UW2 128 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 OR4B1Q8NGF8 309 aa11.42□□□□□ -0.58
GHDC-209ENST00000588762 NBEAL2Q6ZNJ1 2754 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms