RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 DHFR2Q86XF0 187 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 OR8B3Q8NGG8 313 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 PPTC7Q8NI37 304 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 MRPL32Q9BYC8 188 aaKnown RBP3.75□□□□□ -1.81
VMP1-208ENST00000588617 C8orf4Q9NR00 106 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 SIPA1L3O60292 1781 aaPredicted RBP3.75□□□□□ -1.81
VMP1-208ENST00000588617 BCL9O00512 1426 aa3.75□□□□□ -1.81
VMP1-208ENST00000588617 N4BP2Q86UW6 1770 aaPredicted RBP3.74□□□□□ -1.81
VMP1-208ENST00000588617 TLCD2A6NGC4 264 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 ZNF705FA8MVS1 300 aaPredicted RBP3.74□□□□□ -1.81
VMP1-208ENST00000588617 LY6LH3BQJ8 138 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 GLI3P10071 1580 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 FUSP35637 526 aaKnown RBP eCLIP3.74□□□□□ -1.81
VMP1-208ENST00000588617 RHOGP84095 191 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 Q6ZQT0 140 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 OR2T10Q8NGZ9 312 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 PRADC1Q9BSG0 188 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 RTL8AQ9BWD3 113 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 CXCL16Q9H2A7 254 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 KCPQ6ZWJ8 1503 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 SCN11AQ9UI33 1791 aa3.74□□□□□ -1.81
VMP1-208ENST00000588617 PAPPAQ13219 1627 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 NWD2Q9ULI1 1742 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 IGLV3-9A0A075B6K5 115 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 NDUFB3O43676 98 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 NAPSAO96009 420 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 ZNF345Q14585 488 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 TMEM155Q4W5P6 130 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 HSPB9Q9BQS6 159 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 LCE3DQ9BYE3 92 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 LRTM1Q9HBL6 345 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 DENND4CQ5VZ89 1909 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 CICQ96RK0 1608 aaPredicted RBP3.73□□□□□ -1.81
VMP1-208ENST00000588617 KIAA2026Q5HYC2 2103 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 PHLPP1O60346 1717 aa3.73□□□□□ -1.81
VMP1-208ENST00000588617 UBR2Q8IWV8 1755 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 IGKV1D-42A0A075B6H8 117 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 H3BRN7 92 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 FKBP2P26885 142 aaKnown RBP3.72□□□□□ -1.81
VMP1-208ENST00000588617 DYNLT3P51808 116 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 SOSTDC1Q6X4U4 206 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 PDZD9Q8IXQ8 264 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 C12orf29Q8N999 325 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 AIF1LQ9BQI0 150 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 TMEM126AQ9H061 195 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 ASB4Q9Y574 426 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 PTPRBP23467 1997 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 NRAPQ86VF7 1730 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 BCL9LQ86UU0 1499 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 MYH7BA7E2Y1 1941 aa3.72□□□□□ -1.81
VMP1-208ENST00000588617 LAMB4A4D0S4 1761 aa3.71□□□□□ -1.81
VMP1-208ENST00000588617 RGPD2P0DJD1 1756 aa3.71□□□□□ -1.81
VMP1-208ENST00000588617 MYO9BQ13459 2157 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 FUOMA2VDF0 154 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 CTSDP07339 412 aaPredicted RBP3.71□□□□□ -1.82
VMP1-208ENST00000588617 RTL8BQ17RB0 113 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 ST6GALNAC3Q8NDV1 305 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 SLC30A7Q8NEW0 376 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 TTTY12Q9BZ98 90 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 NHP2Q9NX24 153 aaKnown RBP3.71□□□□□ -1.82
VMP1-208ENST00000588617 NUBP2Q9Y5Y2 271 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 ZNF831Q5JPB2 1677 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 RGPD5Q99666 1765 aa3.71□□□□□ -1.82
VMP1-208ENST00000588617 ODAMA1E959 279 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 DYNLT1P63172 113 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 BRMS1LQ5PSV4 323 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 C1orf140Q5VVS0 124 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 THEM6Q8WUY1 208 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 BORCS8Q96FH0 119 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 TEX37Q96LM6 180 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 TXNDC17Q9BRA2 123 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 NPCDR1Q9BY65 106 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 DOCK4Q8N1I0 1966 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 WNK3Q9BYP7 1800 aa3.7□□□□□ -1.82
VMP1-208ENST00000588617 OBSL1O75147 1896 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 CUL9Q8IWT3 2517 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 RFX7Q2KHR2 1363 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 CXCL1P09341 107 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 ARPC4P59998 168 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 MYL5Q02045 173 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 PLCXD2Q0VAA5 305 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 ANGPTL5Q86XS5 388 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 LINC00471Q8N535 108 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 OR4D11Q8NGI4 311 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 CARD19Q96LW7 228 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 ADAT1Q9BUB4 502 aaKnown RBP3.69□□□□□ -1.82
VMP1-208ENST00000588617 POPDC3Q9HBV1 291 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 COL4A2P08572 1712 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 TOGARAM1Q9Y4F4 1720 aa3.69□□□□□ -1.82
VMP1-208ENST00000588617 C5P01031 1676 aa3.68□□□□□ -1.82
VMP1-208ENST00000588617 EP400Q96L91 3159 aa3.68□□□□□ -1.82
VMP1-208ENST00000588617 FAM107AO95990 144 aa3.68□□□□□ -1.82
VMP1-208ENST00000588617 P0DMU3 169 aa3.68□□□□□ -1.82
VMP1-208ENST00000588617 FAM231AP0DMU4 169 aa3.68□□□□□ -1.82
VMP1-208ENST00000588617 FAM231CP0DMU5 169 aa3.68□□□□□ -1.82
VMP1-208ENST00000588617 TMBIM6P55061 237 aa3.68□□□□□ -1.82
VMP1-208ENST00000588617 KRTAP10-10P60014 251 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms