RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 IGKV2D-28P01615 120 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 IGHV1-46P01743 117 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 SERPINE1P05121 402 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 ATP5G1P05496 136 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 CRYBA1P05813 215 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 PFN1P07737 140 aaKnown RBP1.82□□□□□ -2.12
VPS4B-203ENST00000588323 OR5G3P0C626 314 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 OR5AC1P0C628 307 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 CPMP14384 443 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 G6PCP35575 357 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 DEFA3P59666 94 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 GABARAPL2P60520 117 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 RUNX1Q01196 453 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 CAV1Q03135 178 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 PLCXD2Q0VAA5 305 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 DEFB133Q30KQ1 61 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 LINC00483Q53H64 154 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 MESTQ5EB52 335 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 LDLRAD2Q5SZI1 272 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 BCL2L15Q5TBC7 163 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 LAIR2Q6ISS4 152 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 RASL11AQ6T310 242 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 TMEM86BQ8N661 226 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 MIR7-3HGQ8N6C7 128 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 SPANXA2-OT1Q8N9U9 137 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 OR11H6Q8NGC7 330 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 OR8S1Q8NH09 359 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 JOSD2Q8TAC2 188 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 CT55Q8WUE5 264 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 THEM6Q8WUY1 208 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 FRZBQ92765 325 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 RBPMSQ93062 196 aaKnown RBP1.82□□□□□ -2.12
VPS4B-203ENST00000588323 HIST1H2BAQ96A08 127 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 IP6K3Q96PC2 410 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 PEBP4Q96S96 227 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 OR2H1Q9GZK4 316 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 COMMD5Q9GZQ3 224 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 RERGLQ9H628 205 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 GPR84Q9NQS5 396 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 PRTFDC1Q9NRG1 225 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 ASF1BQ9NVP2 202 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 NAT8Q9UHE5 227 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 LINC00527Q9UJ94 153 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 HIGD1AQ9Y241 93 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 SOX21Q9Y651 276 aaPredicted RBP1.82□□□□□ -2.12
VPS4B-203ENST00000588323 HSPE1-MOB4S4R3N1 261 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 RP1P56715 2156 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 BIRC6Q9NR09 4857 aa1.82□□□□□ -2.12
VPS4B-203ENST00000588323 CUBNO60494 3623 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 NBEAL2Q6ZNJ1 2754 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 DENND4CQ5VZ89 1909 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 MGAM2Q2M2H8 2515 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 IGKV2D-24A0A075B6R9 120 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 hCG_1818297A0A087WSY0 165 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 A0A087WX48 190 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 IGHV3-43A0A0B4J1X8 118 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 TRAV38-1A0A0B4J264 116 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 FAM236DA0A1B0GTK5 79 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 A0A1B0GX51 115 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 DUXBA0A1W2PPF3 345 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 DHRS12A0PJE2 317 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 KNCNA6PVL3 124 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 A8MT66 165 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 FABP5P3A8MUU1 101 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 B4DEV8 164 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.81□□□□□ -2.12
VPS4B-203ENST00000588323 K7ERS5 55 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 CCL25O15444 150 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 DEDDO75618 318 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 PIAS1O75925 651 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 LHBP01229 141 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 OPN1SWP03999 348 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 IL4P05112 153 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 CD2P06729 351 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 PAEPP09466 180 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 SMIM17P0DL12 118 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 OR12D1P0DN82 309 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 FAM236CP0DP71 79 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 FGF6P10767 208 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 CCL4P13236 92 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 RPL7P18124 248 aaKnown RBP1.81□□□□□ -2.12
VPS4B-203ENST00000588323 MPV17P39210 176 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 MARCKSL1P49006 195 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 RPS25P62851 125 aaKnown RBP1.81□□□□□ -2.12
VPS4B-203ENST00000588323 GNGT1P63211 74 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF816Q0VGE8 651 aaPredicted RBP1.81□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF846Q147U1 533 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 JOSD1Q15040 202 aaPredicted RBP1.81□□□□□ -2.12
VPS4B-203ENST00000588323 MMDQ15546 238 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 ABCA11PQ4W5N1 156 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 FAM201AQ5SY85 155 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 C1orf194Q5T5A4 169 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 LCN8Q6JVE9 175 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 UNQ9165/PRO28630Q6UXU0 137 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 Q6ZRU5 148 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 NEGR1Q7Z3B1 354 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 ATP5L2Q7Z4Y8 100 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 ZNF695Q8IW36 515 aa1.81□□□□□ -2.12
VPS4B-203ENST00000588323 AMN1Q8IY45 258 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms