RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PLXNB1O43157 2135 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 RPLP1P05386 114 aaKnown RBP11.53□□□□□ -0.56
CCDC43-203ENST00000588210 DLX1P56177 255 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
CCDC43-203ENST00000588210 GDF5OSQ5U4N7 250 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 TMEM116Q8NCL8 245 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 OR1B1Q8NGR6 318 aa11.53□□□□□ -0.56
CCDC43-203ENST00000588210 CORTO00230 105 aa11.52□□□□□ -0.57
CCDC43-203ENST00000588210 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
CCDC43-203ENST00000588210 ORM2P19652 201 aa11.52□□□□□ -0.57
CCDC43-203ENST00000588210 PRRX1P54821 245 aa11.52□□□□□ -0.57
CCDC43-203ENST00000588210 ASPHD1Q5U4P2 390 aa11.52□□□□□ -0.57
CCDC43-203ENST00000588210 RUSC1-AS1Q66K80 236 aa11.52□□□□□ -0.57
CCDC43-203ENST00000588210 ZNF418Q8TF45 676 aaPredicted RBP11.52□□□□□ -0.57
CCDC43-203ENST00000588210 NF1P21359 2839 aa11.52□□□□□ -0.57
CCDC43-203ENST00000588210 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 C3orf79P0CE67 100 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 GP9P14770 177 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 PLP1P60201 277 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 KLRD1Q13241 179 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 BCL6BQ8N143 479 aaPredicted RBP11.51□□□□□ -0.57
CCDC43-203ENST00000588210 MXRA5Q9NR99 2828 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 HYPMO75409 117 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 PRB3Q04118 309 aaPredicted RBP11.51□□□□□ -0.57
CCDC43-203ENST00000588210 TNXAQ16473 311 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 CT83Q5H943 113 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 C5orf17Q8NAS9 161 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 GPR82Q96P67 336 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 MLST8Q9BVC4 326 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
CCDC43-203ENST00000588210 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 PGPA6NDG6 321 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 NPFFO15130 113 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 TCF21O43680 179 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 TOMM40O96008 361 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 NBEAP1P0C6P0 100 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 SPATA45Q537H7 98 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 BLNKQ8WV28 456 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 FMC1Q96HJ9 113 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 IGHV2-26A0A0B4J1V2 119 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 ZNF124Q15973 351 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 OR11H6Q8NGC7 330 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 BORCS7Q96B45 105 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 ALKBH7Q9BT30 221 aaPredicted RBP11.5□□□□□ -0.57
CCDC43-203ENST00000588210 RPP21Q9H633 154 aaKnown RBP11.5□□□□□ -0.57
CCDC43-203ENST00000588210 SIGLEC9Q9Y336 463 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 C2CD3Q4AC94 2353 aa11.5□□□□□ -0.57
CCDC43-203ENST00000588210 LTAP01374 205 aa11.49□□□□□ -0.57
CCDC43-203ENST00000588210 COX7A1P24310 79 aa11.49□□□□□ -0.57
CCDC43-203ENST00000588210 FAM19A2Q8N3H0 131 aa11.49□□□□□ -0.57
CCDC43-203ENST00000588210 JMJD8Q96S16 334 aa11.49□□□□□ -0.57
CCDC43-203ENST00000588210 PRSS22Q9GZN4 317 aa11.49□□□□□ -0.57
CCDC43-203ENST00000588210 F11RQ9Y624 299 aaKnown RBP11.49□□□□□ -0.57
CCDC43-203ENST00000588210 SOX21Q9Y651 276 aaPredicted RBP11.49□□□□□ -0.57
CCDC43-203ENST00000588210 A0A1W2PRD5 423 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 A0A1W2PRF3 423 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 A0A1W2PRM7 423 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 CNTFRP26992 372 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 HILS1P60008 231 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
CCDC43-203ENST00000588210 RBM14Q96PK6 669 aaKnown RBP11.48□□□□□ -0.57
CCDC43-203ENST00000588210 CLEC7AQ9BXN2 247 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 IGHV1-3A0A0C4DH29 117 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 HSBP1O75506 76 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 TCRAP04437 139 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 NTF3P20783 257 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 SAA4P35542 130 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 MMDQ15546 238 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 Q9H3A6 140 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 UQCR10Q9UDW1 63 aa11.48□□□□□ -0.57
CCDC43-203ENST00000588210 ODF3BA8MYP8 253 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 G0S2P27469 103 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 HBBP68871 147 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 PPP1R27Q86WC6 154 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 RPH3ALQ9UNE2 315 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 A8MWL6 223 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 BUB1B-PAK6H3BSN5 160 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 IGLC2P0DOY2 106 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 IGLC3P0DOY3 106 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 ZNF25P17030 456 aaPredicted RBP11.47□□□□□ -0.57
CCDC43-203ENST00000588210 PMCHL1Q16048 86 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 TMEM190Q8WZ59 177 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 GFRA4Q9GZZ7 299 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 TMEM14CQ9P0S9 112 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 HIGD1AQ9Y241 93 aa11.47□□□□□ -0.57
CCDC43-203ENST00000588210 JMJD1CQ15652 2540 aa11.46□□□□□ -0.57
CCDC43-203ENST00000588210 FAM181BA6NEQ2 426 aa11.46□□□□□ -0.57
CCDC43-203ENST00000588210 CAMPP49913 170 aa11.46□□□□□ -0.57
CCDC43-203ENST00000588210 Q6YL49 198 aa11.46□□□□□ -0.57
CCDC43-203ENST00000588210 LINC00322Q6ZN03 302 aaPredicted RBP11.46□□□□□ -0.57
CCDC43-203ENST00000588210 TCF24Q7RTU0 167 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms