RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ELOVL1Q9BW60 279 aa8.56□□□□□ -1.04
VMP1-207ENST00000588131 PEMTQ9UBM1 199 aa8.56□□□□□ -1.04
VMP1-207ENST00000588131 MLXQ9UH92 298 aa8.56□□□□□ -1.04
VMP1-207ENST00000588131 VAX2Q9UIW0 290 aa8.56□□□□□ -1.04
VMP1-207ENST00000588131 A0A1W2PRE2 83 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 ZNF785A8K8V0 405 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 GGTLC3B5MD39 225 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 OVOL1O14753 267 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 GALR1P47211 349 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
VMP1-207ENST00000588131 MEF2BQ02080 365 aaPredicted RBP8.55□□□□□ -1.04
VMP1-207ENST00000588131 PEA15Q15121 130 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 FAM90A2PQ658T7 463 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 ZNF747Q9BV97 191 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 TREM1Q9NP99 234 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 ARL2-SNX15V9GYD0 113 aa8.55□□□□□ -1.04
VMP1-207ENST00000588131 C11orf94C9JXX5 98 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 PF4P02776 101 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 SRP19P09132 144 aaKnown RBP8.54□□□□□ -1.04
VMP1-207ENST00000588131 TAGLN2P37802 199 aaKnown RBP8.54□□□□□ -1.04
VMP1-207ENST00000588131 SUMO1P63165 101 aaKnown RBP8.54□□□□□ -1.04
VMP1-207ENST00000588131 IGFL4Q6B9Z1 124 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 UQCC3Q6UW78 93 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 CCDC28AQ8IWP9 274 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 EXOC3-AS1Q8N2X6 119 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 LINC00482Q8N8I6 264 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 SPATA3Q8NHX4 192 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 TMEM158Q8WZ71 300 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 Q9H3A6 140 aa8.54□□□□□ -1.04
VMP1-207ENST00000588131 IGKV3-7A0A075B6H7 116 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 TRAV8-2A0A0B4J237 113 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 HELTA6NFD8 242 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 M0QZ24 198 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 PRB4P10163 310 aaPredicted RBP8.53□□□□□ -1.04
VMP1-207ENST00000588131 HLA-DMBP28068 263 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 BMI1P35226 326 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 C12orf54Q6X4T0 127 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 JMJD1CQ15652 2540 aa8.53□□□□□ -1.04
VMP1-207ENST00000588131 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 PGPA6NDG6 321 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 SOCS3O14543 225 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 ZNF253O75346 499 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 ATP6V1G1O75348 118 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 RPL11P62913 178 aaKnown RBP8.52□□□□□ -1.05
VMP1-207ENST00000588131 GNG5P63218 68 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 PDE6HQ13956 83 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 GBGT1Q8N5D6 347 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 C3orf56Q8N813 242 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 CYB561D1Q8N8Q1 229 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 DYNLRB2Q8TF09 96 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 SMDT1Q9H4I9 107 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 ZNF331Q9NQX6 463 aaPredicted RBP8.52□□□□□ -1.05
VMP1-207ENST00000588131 OTORQ9NRC9 128 aa8.52□□□□□ -1.05
VMP1-207ENST00000588131 TMEM218A2RU14 115 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 M0R3E3 92 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 SLC25A5P05141 298 aaKnown RBP8.51□□□□□ -1.05
VMP1-207ENST00000588131 SFTA3P0C7M3 94 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 ADCYAP1P18509 176 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 MEOX2P50222 304 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 CEBPGP53567 150 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 PSG9Q00887 426 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 DEFB114Q30KQ6 69 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 LYPD1Q8N2G4 141 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 RNF182Q8N6D2 247 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 LINC00052Q96N35 136 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 TXNDC17Q9BRA2 123 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 SLC50A1Q9BRV3 221 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 MS4A6AQ9H2W1 248 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 SIGLEC8Q9NYZ4 499 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 RPH3ALQ9UNE2 315 aa8.51□□□□□ -1.05
VMP1-207ENST00000588131 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.05
VMP1-207ENST00000588131 F6UZH7 168 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 PDE6DO43924 150 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 TFPI2P48307 235 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 CD300EQ496F6 205 aaPredicted RBP8.5□□□□□ -1.05
VMP1-207ENST00000588131 SHISA2Q6UWI4 295 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 WFDC3Q8IUB2 231 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 TMEM61Q8N0U2 210 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 DCANP1Q8TF63 244 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 C11orf52Q96A22 123 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 NKX6-2Q9C056 277 aaPredicted RBP8.5□□□□□ -1.05
VMP1-207ENST00000588131 AAMDCQ9H7C9 122 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 EPDR1Q9UM22 224 aa8.5□□□□□ -1.05
VMP1-207ENST00000588131 IZUMO1RA6ND01 250 aa8.49□□□□□ -1.05
VMP1-207ENST00000588131 TMEM250H0YL14 139 aa8.49□□□□□ -1.05
VMP1-207ENST00000588131 PEX7O00628 323 aa8.49□□□□□ -1.05
VMP1-207ENST00000588131 NDUFS6O75380 124 aaKnown RBP8.49□□□□□ -1.05
VMP1-207ENST00000588131 SAP30O75446 220 aa8.49□□□□□ -1.05
VMP1-207ENST00000588131 FAM24BQ8N5W8 94 aa8.49□□□□□ -1.05
VMP1-207ENST00000588131 C5orf17Q8NAS9 161 aa8.49□□□□□ -1.05
VMP1-207ENST00000588131 RPUSD4Q96CM3 377 aaKnown RBP8.49□□□□□ -1.05
VMP1-207ENST00000588131 DERL1Q9BUN8 251 aa8.49□□□□□ -1.05
VMP1-207ENST00000588131 ZNF705FA8MVS1 300 aaPredicted RBP8.48□□□□□ -1.05
VMP1-207ENST00000588131 PRAC2D3DTV9 90 aa8.48□□□□□ -1.05
VMP1-207ENST00000588131 K7EQG2 157 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms