RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 FAM74A7A6NL05 159 aa12.26□□□□□ -0.45
NLE1-204ENST00000588019 RPL11P62913 178 aaKnown RBP12.26□□□□□ -0.45
NLE1-204ENST00000588019 PSG9Q00887 426 aa12.26□□□□□ -0.45
NLE1-204ENST00000588019 UQCC3Q6UW78 93 aa12.26□□□□□ -0.45
NLE1-204ENST00000588019 ADAMTSL5Q6ZMM2 481 aa12.26□□□□□ -0.45
NLE1-204ENST00000588019 EIF4E3Q8N5X7 224 aaKnown RBP12.26□□□□□ -0.45
NLE1-204ENST00000588019 LINC00482Q8N8I6 264 aa12.26□□□□□ -0.45
NLE1-204ENST00000588019 DYNLRB2Q8TF09 96 aa12.26□□□□□ -0.45
NLE1-204ENST00000588019 NDUFS6O75380 124 aaKnown RBP12.25□□□□□ -0.45
NLE1-204ENST00000588019 SNRPCP09234 159 aaKnown RBP12.25□□□□□ -0.45
NLE1-204ENST00000588019 RANP62826 216 aaKnown RBP12.25□□□□□ -0.45
NLE1-204ENST00000588019 MEF2BQ02080 365 aaPredicted RBP12.25□□□□□ -0.45
NLE1-204ENST00000588019 SAMD13Q5VXD3 122 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 FAM90A2PQ658T7 463 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 RARRES2Q99969 163 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 SLC50A1Q9BRV3 221 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 NRN1Q9NPD7 142 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 MLXQ9UH92 298 aa12.25□□□□□ -0.45
NLE1-204ENST00000588019 YTHDF2Q9Y5A9 579 aaKnown RBP12.25□□□□□ -0.45
NLE1-204ENST00000588019 C11orf94C9JXX5 98 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 H3BTX0 84 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 NDUFB4O95168 129 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 ICAM4Q14773 271 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 RXFP4Q8TDU9 374 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 Q9H3A6 140 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 AAMDCQ9H7C9 122 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 CLEC5AQ9NY25 188 aa12.24□□□□□ -0.45
NLE1-204ENST00000588019 PGPA6NDG6 321 aa12.23□□□□□ -0.45
NLE1-204ENST00000588019 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
NLE1-204ENST00000588019 PAFAH1B2P68402 229 aa12.23□□□□□ -0.45
NLE1-204ENST00000588019 DEFB114Q30KQ6 69 aa12.23□□□□□ -0.45
NLE1-204ENST00000588019 SLC7A5P1Q8MH63 180 aa12.23□□□□□ -0.45
NLE1-204ENST00000588019 TCEAL7Q9BRU2 100 aa12.23□□□□□ -0.45
NLE1-204ENST00000588019 TREM1Q9NP99 234 aa12.23□□□□□ -0.45
NLE1-204ENST00000588019 ZNF331Q9NQX6 463 aaPredicted RBP12.23□□□□□ -0.45
NLE1-204ENST00000588019 TRAV25A0A0B4J276 109 aa12.22□□□□□ -0.45
NLE1-204ENST00000588019 F6UZH7 168 aa12.22□□□□□ -0.45
NLE1-204ENST00000588019 SLC17A3O00476 420 aa12.22□□□□□ -0.45
NLE1-204ENST00000588019 PDE6DO43924 150 aa12.22□□□□□ -0.45
NLE1-204ENST00000588019 SAP30O75446 220 aa12.22□□□□□ -0.45
NLE1-204ENST00000588019 ATP5G3P48201 142 aa12.22□□□□□ -0.45
NLE1-204ENST00000588019 RBPMS2Q6ZRY4 209 aaKnown RBP12.22□□□□□ -0.45
NLE1-204ENST00000588019 GGTLC3B5MD39 225 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 DNASE2O00115 360 aaPredicted RBP12.21□□□□□ -0.45
NLE1-204ENST00000588019 RIPPLY3P57055 190 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 CD81P60033 236 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 SRSF3P84103 164 aaKnown RBP12.21□□□□□ -0.45
NLE1-204ENST00000588019 CCDC28AQ8IWP9 274 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 ARL6IP6Q8N6S5 226 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 OR2K2Q8NGT1 345 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 C16orf92Q96LL3 132 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 MCRIP2Q9BUT9 160 aaKnown RBP12.21□□□□□ -0.45
NLE1-204ENST00000588019 PRELID1Q9Y255 219 aa12.21□□□□□ -0.45
NLE1-204ENST00000588019 IGKV3-7A0A075B6H7 116 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 TRAV2A0A0B4J234 112 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 ISLRO14498 428 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 TSPAN4O14817 238 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 SLC25A5P05141 298 aaKnown RBP12.2□□□□□ -0.46
NLE1-204ENST00000588019 ID1P41134 155 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 INSL3P51460 131 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 EXOC3-AS1Q8N2X6 119 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 CMTM2Q8TAZ6 248 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 CITED4Q96RK1 184 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 MS4A6AQ9H2W1 248 aa12.2□□□□□ -0.46
NLE1-204ENST00000588019 SOCS3O14543 225 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 SRP19P09132 144 aaKnown RBP12.19□□□□□ -0.46
NLE1-204ENST00000588019 CD33P20138 364 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 CSN1S1P47710 185 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 CD300EQ496F6 205 aaPredicted RBP12.19□□□□□ -0.46
NLE1-204ENST00000588019 TMEM61Q8N0U2 210 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 GBGT1Q8N5D6 347 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 DCANP1Q8TF63 244 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 HIST1H2BAQ96A08 127 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 MRPL53Q96EL3 112 aaKnown RBP12.19□□□□□ -0.46
NLE1-204ENST00000588019 SLC35B3Q9H1N7 401 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 EPDR1Q9UM22 224 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 SELENOKQ9Y6D0 94 aa12.19□□□□□ -0.46
NLE1-204ENST00000588019 SETD2Q9BYW2 2564 aaPredicted RBP12.19□□□□□ -0.46
NLE1-204ENST00000588019 C9JQL5 133 aa12.18□□□□□ -0.46
NLE1-204ENST00000588019 K7EQG2 157 aa12.18□□□□□ -0.46
NLE1-204ENST00000588019 IGLV1-51P01701 117 aa12.18□□□□□ -0.46
NLE1-204ENST00000588019 C9orf66Q5T8R8 295 aa12.18□□□□□ -0.46
NLE1-204ENST00000588019 WFDC3Q8IUB2 231 aa12.18□□□□□ -0.46
NLE1-204ENST00000588019 C11orf52Q96A22 123 aa12.18□□□□□ -0.46
NLE1-204ENST00000588019 RPUSD4Q96CM3 377 aaKnown RBP12.18□□□□□ -0.46
NLE1-204ENST00000588019 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
NLE1-204ENST00000588019 TRAV8-2A0A0B4J237 113 aa12.17□□□□□ -0.46
NLE1-204ENST00000588019 SNRPD3P62318 126 aaKnown RBP12.17□□□□□ -0.46
NLE1-204ENST00000588019 PSG3Q16557 428 aa12.17□□□□□ -0.46
NLE1-204ENST00000588019 SERTM2A0A1B0GWG4 89 aa12.16□□□□□ -0.46
NLE1-204ENST00000588019 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
NLE1-204ENST00000588019 TMEM218A2RU14 115 aa12.16□□□□□ -0.46
NLE1-204ENST00000588019 OR4C46A6NHA9 309 aa12.16□□□□□ -0.46
NLE1-204ENST00000588019 PEX7O00628 323 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 429.1 ms