RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 GSKIPQ9P0R6 139 aa13.29□□□□□ -0.28
TRIM47-205ENST00000587774 IGLV2-18A0A075B6J9 118 aa13.28□□□□□ -0.28
TRIM47-205ENST00000587774 MRPS12O15235 138 aaKnown RBP13.28□□□□□ -0.28
TRIM47-205ENST00000587774 TAS2R30P59541 319 aa13.28□□□□□ -0.28
TRIM47-205ENST00000587774 HIST1H1AQ02539 215 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-205ENST00000587774 ARL16Q0P5N6 197 aa13.28□□□□□ -0.28
TRIM47-205ENST00000587774 OR8A1Q8NGG7 326 aa13.28□□□□□ -0.28
TRIM47-205ENST00000587774 C20orf85Q9H1P6 137 aa13.28□□□□□ -0.28
TRIM47-205ENST00000587774 C7orf66A4D0T2 115 aa13.27□□□□□ -0.29
TRIM47-205ENST00000587774 CCSO14618 274 aa13.27□□□□□ -0.29
TRIM47-205ENST00000587774 MBPP02686 304 aaPredicted RBP13.27□□□□□ -0.29
TRIM47-205ENST00000587774 LGALS9BQ3B8N2 356 aa13.27□□□□□ -0.29
TRIM47-205ENST00000587774 S100A7AQ86SG5 101 aa13.27□□□□□ -0.29
TRIM47-205ENST00000587774 ZNF546Q86UE3 836 aa13.27□□□□□ -0.29
TRIM47-205ENST00000587774 PLAC8L1A1L4L8 177 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 LYRM9A8MSI8 78 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 AGPAT2O15120 278 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 TSPOP30536 169 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 B2MP61769 119 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 RHOBP62745 196 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 PSG3Q16557 428 aa13.26□□□□□ -0.29
TRIM47-205ENST00000587774 GOSR2O14653 212 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 AZU1P20160 251 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 RNF212Q495C1 297 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 PXDC1Q5TGL8 231 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 Q6ZR54 194 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 LINC00305Q7Z4B0 112 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 LRRC20Q8TCA0 184 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 MGST2Q99735 147 aa13.25□□□□□ -0.29
TRIM47-205ENST00000587774 PLA2G10O15496 165 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 SNRPCP09234 159 aaKnown RBP13.24□□□□□ -0.29
TRIM47-205ENST00000587774 DEFB130BP0DP73 79 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 DEFB130AP0DP74 79 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 CXCL2P19875 107 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 CNPY1Q3B7I2 92 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 MORN5Q5VZ52 161 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 LCN15Q6UWW0 184 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 TMEM256Q8N2U0 113 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
TRIM47-205ENST00000587774 GGACTQ9BVM4 153 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
TRIM47-205ENST00000587774 RNF24Q9Y225 148 aa13.24□□□□□ -0.29
TRIM47-205ENST00000587774 LYRM1O43325 122 aa13.23□□□□□ -0.29
TRIM47-205ENST00000587774 COX7A2P2O60397 106 aa13.23□□□□□ -0.29
TRIM47-205ENST00000587774 FCN2Q15485 313 aa13.23□□□□□ -0.29
TRIM47-205ENST00000587774 C15orf53Q8NAA6 179 aa13.23□□□□□ -0.29
TRIM47-205ENST00000587774 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
TRIM47-205ENST00000587774 SLC50A1Q9BRV3 221 aa13.23□□□□□ -0.29
TRIM47-205ENST00000587774 PPP1R14DQ9NXH3 145 aa13.23□□□□□ -0.29
TRIM47-205ENST00000587774 TRAV6A0A075B6T7 132 aa13.22□□□□□ -0.29
TRIM47-205ENST00000587774 L7N2F9 121 aa13.22□□□□□ -0.29
TRIM47-205ENST00000587774 SLC17A3O00476 420 aa13.22□□□□□ -0.29
TRIM47-205ENST00000587774 VAMP2P63027 116 aa13.22□□□□□ -0.29
TRIM47-205ENST00000587774 ZNF846Q147U1 533 aa13.22□□□□□ -0.29
TRIM47-205ENST00000587774 LINC01587Q99440 93 aa13.22□□□□□ -0.29
TRIM47-205ENST00000587774 LSM5Q9Y4Y9 91 aaKnown RBP13.22□□□□□ -0.29
TRIM47-205ENST00000587774 FAM25EA8MYX2 175 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 H3BTX0 84 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 CDKN1BP46527 198 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 TAS2R60P59551 318 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 OPCMLQ14982 345 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 C16orf74Q96GX8 76 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 SEC22CQ9BRL7 303 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 NUDT15Q9NV35 164 aa13.21□□□□□ -0.29
TRIM47-205ENST00000587774 CST7O76096 145 aa13.2□□□□□ -0.3
TRIM47-205ENST00000587774 TCRBP04435 133 aa13.2□□□□□ -0.3
TRIM47-205ENST00000587774 IGLC2P0DOY2 106 aa13.2□□□□□ -0.3
TRIM47-205ENST00000587774 HTN1P15515 57 aa13.2□□□□□ -0.3
TRIM47-205ENST00000587774 C10orf113Q5VZT2 155 aa13.2□□□□□ -0.3
TRIM47-205ENST00000587774 PARD6GQ9BYG4 376 aaPredicted RBP13.2□□□□□ -0.3
TRIM47-205ENST00000587774 C11orf1Q9H5F2 150 aa13.2□□□□□ -0.3
TRIM47-205ENST00000587774 PRAC2D3DTV9 90 aa13.19□□□□□ -0.3
TRIM47-205ENST00000587774 F5H768 121 aa13.19□□□□□ -0.3
TRIM47-205ENST00000587774 CAMLGP49069 296 aa13.19□□□□□ -0.3
TRIM47-205ENST00000587774 BCAP31P51572 246 aa13.19□□□□□ -0.3
TRIM47-205ENST00000587774 CAV2P51636 162 aa13.19□□□□□ -0.3
TRIM47-205ENST00000587774 KIR3DS1Q14943 382 aa13.19□□□□□ -0.3
TRIM47-205ENST00000587774 NRARPQ7Z6K4 114 aa13.19□□□□□ -0.3
TRIM47-205ENST00000587774 RNASE8Q8TDE3 154 aaKnown RBP13.19□□□□□ -0.3
TRIM47-205ENST00000587774 ZNF431Q8TF32 576 aaPredicted RBP13.19□□□□□ -0.3
TRIM47-205ENST00000587774 C5orf51A6NDU8 294 aa13.18□□□□□ -0.3
TRIM47-205ENST00000587774 ATP5G1P05496 136 aa13.18□□□□□ -0.3
TRIM47-205ENST00000587774 ATP5G3P48201 142 aa13.18□□□□□ -0.3
TRIM47-205ENST00000587774 MIC13Q5XKP0 118 aa13.18□□□□□ -0.3
TRIM47-205ENST00000587774 TMEM263Q8WUH6 116 aaKnown RBP13.18□□□□□ -0.3
TRIM47-205ENST00000587774 ATG101Q9BSB4 218 aa13.18□□□□□ -0.3
TRIM47-205ENST00000587774 FAM24AA6NFZ4 105 aa13.17□□□□□ -0.3
TRIM47-205ENST00000587774 H3BQ15 152 aa13.17□□□□□ -0.3
TRIM47-205ENST00000587774 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
TRIM47-205ENST00000587774 SAT2Q96F10 170 aaPredicted RBP13.17□□□□□ -0.3
TRIM47-205ENST00000587774 UQCC1Q9NVA1 299 aa13.17□□□□□ -0.3
TRIM47-205ENST00000587774 WDR83OSQ9Y284 106 aa13.17□□□□□ -0.3
TRIM47-205ENST00000587774 TIMM8BQ9Y5J9 83 aaPredicted RBP13.17□□□□□ -0.3
TRIM47-205ENST00000587774 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
TRIM47-205ENST00000587774 TRAV5A0A0B4J249 113 aa13.16□□□□□ -0.3
TRIM47-205ENST00000587774 UBE2L5PA0A1B0GUS4 154 aa13.16□□□□□ -0.3
TRIM47-205ENST00000587774 CBY3A6NI87 242 aa13.16□□□□□ -0.3
TRIM47-205ENST00000587774 H7BYZ3 331 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms